Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHGA12O60330 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHGA12O60330 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA12O60330 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA12O60330 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA12O60330 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA12O60330 AC004812.2-201ENST00000611079 2094 ntBASIC21.56■■□□□ 1.04
PCDHGA12O60330 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PCDHGA12O60330 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA12O60330 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA12O60330 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA12O60330 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA12O60330 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA12O60330 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA12O60330 AC068587.7-201ENST00000641602 218 ntBASIC21.56■■□□□ 1.04
PCDHGA12O60330 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHGA12O60330 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PCDHGA12O60330 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA12O60330 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
PCDHGA12O60330 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHGA12O60330 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHGA12O60330 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA12O60330 BX005040.4-201ENST00000637145 1518 ntBASIC21.55■■□□□ 1.04
PCDHGA12O60330 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PCDHGA12O60330 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA12O60330 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA12O60330 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA12O60330 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA12O60330 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHGA12O60330 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA12O60330 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDHGA12O60330 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHGA12O60330 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHGA12O60330 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHGA12O60330 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHGA12O60330 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDHGA12O60330 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA12O60330 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA12O60330 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA12O60330 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA12O60330 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGA12O60330 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGA12O60330 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGA12O60330 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHGA12O60330 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PCDHGA12O60330 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHGA12O60330 AC026185.1-201ENST00000445748 174 ntBASIC21.54■■□□□ 1.04
PCDHGA12O60330 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGA12O60330 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHGA12O60330 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHGA12O60330 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.54■■□□□ 1.04
PCDHGA12O60330 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.54■■□□□ 1.04
PCDHGA12O60330 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PCDHGA12O60330 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGA12O60330 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA12O60330 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGA12O60330 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDHGA12O60330 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PCDHGA12O60330 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGA12O60330 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.53■■□□□ 1.04
PCDHGA12O60330 BID-214ENST00000617586 542 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDHGA12O60330 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDHGA12O60330 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA12O60330 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA12O60330 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA12O60330 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDHGA12O60330 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDHGA12O60330 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA12O60330 AC004854.2-201ENST00000608450 1441 ntBASIC21.53■■□□□ 1.04
PCDHGA12O60330 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA12O60330 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA12O60330 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGA12O60330 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGA12O60330 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGA12O60330 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHGA12O60330 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDHGA12O60330 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGA12O60330 KRT19P1-201ENST00000405746 1186 ntBASIC21.52■■□□□ 1.04
PCDHGA12O60330 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHGA12O60330 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHGA12O60330 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGA12O60330 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PCDHGA12O60330 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA12O60330 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA12O60330 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGA12O60330 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGA12O60330 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA12O60330 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA12O60330 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA12O60330 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHGA12O60330 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.5■■□□□ 1.03
PCDHGA12O60330 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA12O60330 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms