Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6DO43924 FEM1AP4-201ENST00000443167 1987 ntBASIC16.84■□□□□ 0.29
PDE6DO43924 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6DO43924 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6DO43924 AC011551.1-201ENST00000614101 683 ntBASIC16.84■□□□□ 0.29
PDE6DO43924 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6DO43924 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6DO43924 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6DO43924 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PDE6DO43924 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6DO43924 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6DO43924 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PDE6DO43924 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PDE6DO43924 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6DO43924 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6DO43924 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6DO43924 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6DO43924 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PDE6DO43924 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6DO43924 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDE6DO43924 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6DO43924 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6DO43924 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6DO43924 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6DO43924 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6DO43924 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.83■□□□□ 0.28
PDE6DO43924 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6DO43924 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6DO43924 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PDE6DO43924 MIR3648-2-201ENST00000581792 180 ntBASIC16.83■□□□□ 0.28
PDE6DO43924 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6DO43924 MIR3648-1-201ENST00000615959 180 ntBASIC16.83■□□□□ 0.28
PDE6DO43924 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6DO43924 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6DO43924 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6DO43924 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
PDE6DO43924 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6DO43924 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6DO43924 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.82■□□□□ 0.28
PDE6DO43924 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6DO43924 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6DO43924 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6DO43924 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.82■□□□□ 0.28
PDE6DO43924 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6DO43924 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.82■□□□□ 0.28
PDE6DO43924 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6DO43924 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PDE6DO43924 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PDE6DO43924 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6DO43924 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6DO43924 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PDE6DO43924 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6DO43924 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PDE6DO43924 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PDE6DO43924 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PDE6DO43924 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6DO43924 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PDE6DO43924 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.81■□□□□ 0.28
PDE6DO43924 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
PDE6DO43924 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 LINC01960-201ENST00000563759 1884 ntBASIC16.81■□□□□ 0.28
PDE6DO43924 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6DO43924 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6DO43924 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.8■□□□□ 0.28
PDE6DO43924 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDE6DO43924 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDE6DO43924 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDE6DO43924 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.8■□□□□ 0.28
PDE6DO43924 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6DO43924 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6DO43924 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6DO43924 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6DO43924 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDE6DO43924 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.8■□□□□ 0.28
PDE6DO43924 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6DO43924 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.8■□□□□ 0.28
PDE6DO43924 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.8■□□□□ 0.28
PDE6DO43924 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6DO43924 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6DO43924 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6DO43924 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6DO43924 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.8■□□□□ 0.28
PDE6DO43924 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDE6DO43924 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.8■□□□□ 0.28
PDE6DO43924 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6DO43924 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6DO43924 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms