Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE3O43900 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.94■□□□□ 0.94
PRICKLE3O43900 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.94■□□□□ 0.94
PRICKLE3O43900 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.94■□□□□ 0.94
PRICKLE3O43900 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE3O43900 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.94■□□□□ 0.94
PRICKLE3O43900 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE3O43900 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE3O43900 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE3O43900 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PRICKLE3O43900 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE3O43900 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE3O43900 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE3O43900 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE3O43900 LINC00526-201ENST00000581067 1875 ntBASIC20.94■□□□□ 0.94
PRICKLE3O43900 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PRICKLE3O43900 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PRICKLE3O43900 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.94■□□□□ 0.94
PRICKLE3O43900 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
PRICKLE3O43900 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRICKLE3O43900 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRICKLE3O43900 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.93■□□□□ 0.94
PRICKLE3O43900 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRICKLE3O43900 AC012414.1-201ENST00000556676 535 ntBASIC20.93■□□□□ 0.94
PRICKLE3O43900 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.93■□□□□ 0.94
PRICKLE3O43900 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.93■□□□□ 0.94
PRICKLE3O43900 AC105233.4-201ENST00000642045 216 ntBASIC20.93■□□□□ 0.94
PRICKLE3O43900 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRICKLE3O43900 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRICKLE3O43900 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PRICKLE3O43900 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRICKLE3O43900 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRICKLE3O43900 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRICKLE3O43900 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRICKLE3O43900 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.92■□□□□ 0.94
PRICKLE3O43900 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE3O43900 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE3O43900 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE3O43900 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PRICKLE3O43900 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.92■□□□□ 0.94
PRICKLE3O43900 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.92■□□□□ 0.94
PRICKLE3O43900 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.92■□□□□ 0.94
PRICKLE3O43900 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
PRICKLE3O43900 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.92■□□□□ 0.94
PRICKLE3O43900 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.92■□□□□ 0.94
PRICKLE3O43900 AL358852.1-201ENST00000623174 1268 ntBASIC20.92■□□□□ 0.94
PRICKLE3O43900 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE3O43900 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE3O43900 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE3O43900 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE3O43900 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE3O43900 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.92■□□□□ 0.94
PRICKLE3O43900 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRICKLE3O43900 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRICKLE3O43900 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRICKLE3O43900 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRICKLE3O43900 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.91■□□□□ 0.94
PRICKLE3O43900 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRICKLE3O43900 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.91■□□□□ 0.94
PRICKLE3O43900 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRICKLE3O43900 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.91■□□□□ 0.94
PRICKLE3O43900 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.91■□□□□ 0.94
PRICKLE3O43900 AL354811.1-201ENST00000610286 706 ntBASIC20.91■□□□□ 0.94
PRICKLE3O43900 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PRICKLE3O43900 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PRICKLE3O43900 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.9■□□□□ 0.94
PRICKLE3O43900 AC139530.1-201ENST00000575312 1977 ntBASIC20.9■□□□□ 0.94
PRICKLE3O43900 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE3O43900 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE3O43900 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE3O43900 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE3O43900 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE3O43900 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.9■□□□□ 0.94
PRICKLE3O43900 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE3O43900 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE3O43900 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE3O43900 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PRICKLE3O43900 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE3O43900 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.89■□□□□ 0.94
PRICKLE3O43900 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.89■□□□□ 0.94
PRICKLE3O43900 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PRICKLE3O43900 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE3O43900 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE3O43900 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE3O43900 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PRICKLE3O43900 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.89■□□□□ 0.93
PRICKLE3O43900 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE3O43900 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE3O43900 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.89■□□□□ 0.93
PRICKLE3O43900 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.89■□□□□ 0.93
PRICKLE3O43900 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE3O43900 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE3O43900 AC080038.3-201ENST00000623346 1952 ntBASIC20.88■□□□□ 0.93
PRICKLE3O43900 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE3O43900 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.88■□□□□ 0.93
PRICKLE3O43900 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE3O43900 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PRICKLE3O43900 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.88■□□□□ 0.93
PRICKLE3O43900 AC092666.2-201ENST00000613287 246 ntBASIC20.88■□□□□ 0.93
PRICKLE3O43900 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms