Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.54■□□□□ 0.88
RRP8O43159 AC105036.2-201ENST00000569468 176 ntBASIC20.54■□□□□ 0.88
RRP8O43159 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
RRP8O43159 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RRP8O43159 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RRP8O43159 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RRP8O43159 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RRP8O43159 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RRP8O43159 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RRP8O43159 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.53■□□□□ 0.88
RRP8O43159 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RRP8O43159 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.53■□□□□ 0.88
RRP8O43159 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.53■□□□□ 0.88
RRP8O43159 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.53■□□□□ 0.88
RRP8O43159 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.53■□□□□ 0.88
RRP8O43159 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RRP8O43159 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RRP8O43159 MIR4758-201ENST00000577688 71 ntBASIC20.53■□□□□ 0.88
RRP8O43159 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RRP8O43159 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RRP8O43159 KRT87P-202ENST00000534226 1464 ntBASIC20.53■□□□□ 0.88
RRP8O43159 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.53■□□□□ 0.88
RRP8O43159 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RRP8O43159 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RRP8O43159 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RRP8O43159 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RRP8O43159 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RRP8O43159 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RRP8O43159 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.53■□□□□ 0.88
RRP8O43159 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RRP8O43159 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RRP8O43159 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RRP8O43159 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RRP8O43159 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RRP8O43159 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RRP8O43159 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RRP8O43159 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.52■□□□□ 0.88
RRP8O43159 RNA5SP413-201ENST00000516373 109 ntBASIC20.52■□□□□ 0.88
RRP8O43159 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
RRP8O43159 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RRP8O43159 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RRP8O43159 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RRP8O43159 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.52■□□□□ 0.88
RRP8O43159 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RRP8O43159 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RRP8O43159 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
RRP8O43159 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RRP8O43159 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RRP8O43159 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RRP8O43159 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RRP8O43159 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
RRP8O43159 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RRP8O43159 AC133552.2-202ENST00000575694 574 ntBASIC20.51■□□□□ 0.87
RRP8O43159 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.51■□□□□ 0.87
RRP8O43159 UBE2DNL-204ENST00000602536 740 ntBASIC20.51■□□□□ 0.87
RRP8O43159 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.51■□□□□ 0.87
RRP8O43159 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RRP8O43159 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RRP8O43159 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RRP8O43159 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RRP8O43159 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RRP8O43159 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.5■□□□□ 0.87
RRP8O43159 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.5■□□□□ 0.87
RRP8O43159 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.5■□□□□ 0.87
RRP8O43159 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RRP8O43159 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RRP8O43159 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RRP8O43159 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
RRP8O43159 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.5■□□□□ 0.87
RRP8O43159 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RRP8O43159 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.5■□□□□ 0.87
RRP8O43159 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.5■□□□□ 0.87
RRP8O43159 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RRP8O43159 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.49■□□□□ 0.87
RRP8O43159 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
RRP8O43159 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.49■□□□□ 0.87
RRP8O43159 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.49■□□□□ 0.87
RRP8O43159 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.49■□□□□ 0.87
RRP8O43159 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RRP8O43159 MYCNOS-205ENST00000641950 531 ntBASIC20.49■□□□□ 0.87
RRP8O43159 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RRP8O43159 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RRP8O43159 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RRP8O43159 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RRP8O43159 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RRP8O43159 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RRP8O43159 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RRP8O43159 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.48■□□□□ 0.87
RRP8O43159 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RRP8O43159 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RRP8O43159 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RRP8O43159 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RRP8O43159 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RRP8O43159 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RRP8O43159 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RRP8O43159 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RRP8O43159 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RRP8O43159 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.47■□□□□ 0.87
RRP8O43159 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.47■□□□□ 0.87
RRP8O43159 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms