Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COPEO14579 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPEO14579 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPEO14579 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPEO14579 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPEO14579 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPEO14579 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.71■■□□□ 1.07
COPEO14579 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPEO14579 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPEO14579 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
COPEO14579 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPEO14579 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.71■■□□□ 1.07
COPEO14579 YBX1P4-201ENST00000392794 808 ntBASIC21.71■■□□□ 1.07
COPEO14579 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.71■■□□□ 1.07
COPEO14579 CA15P2-201ENST00000611168 834 ntBASIC21.71■■□□□ 1.07
COPEO14579 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPEO14579 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COPEO14579 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPEO14579 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPEO14579 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPEO14579 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COPEO14579 KRT8P33-201ENST00000508125 1423 ntBASIC21.71■■□□□ 1.07
COPEO14579 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPEO14579 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPEO14579 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
COPEO14579 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPEO14579 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPEO14579 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPEO14579 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPEO14579 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.7■■□□□ 1.06
COPEO14579 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPEO14579 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPEO14579 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.7■■□□□ 1.06
COPEO14579 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.7■■□□□ 1.06
COPEO14579 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
COPEO14579 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COPEO14579 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
COPEO14579 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.7■■□□□ 1.06
COPEO14579 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPEO14579 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
COPEO14579 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
COPEO14579 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPEO14579 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.69■■□□□ 1.06
COPEO14579 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPEO14579 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
COPEO14579 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COPEO14579 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPEO14579 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPEO14579 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.69■■□□□ 1.06
COPEO14579 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPEO14579 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.69■■□□□ 1.06
COPEO14579 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COPEO14579 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPEO14579 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COPEO14579 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.69■■□□□ 1.06
COPEO14579 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPEO14579 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPEO14579 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.68■■□□□ 1.06
COPEO14579 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPEO14579 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COPEO14579 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COPEO14579 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPEO14579 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPEO14579 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
COPEO14579 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.68■■□□□ 1.06
COPEO14579 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPEO14579 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPEO14579 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPEO14579 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COPEO14579 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPEO14579 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.67■■□□□ 1.06
COPEO14579 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.67■■□□□ 1.06
COPEO14579 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPEO14579 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPEO14579 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COPEO14579 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPEO14579 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.66■■□□□ 1.06
COPEO14579 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPEO14579 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPEO14579 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.66■■□□□ 1.06
COPEO14579 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPEO14579 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COPEO14579 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COPEO14579 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.66■■□□□ 1.06
COPEO14579 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.66■■□□□ 1.06
COPEO14579 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
COPEO14579 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
COPEO14579 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPEO14579 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
COPEO14579 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPEO14579 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPEO14579 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.66■■□□□ 1.06
COPEO14579 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.65■■□□□ 1.06
COPEO14579 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPEO14579 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPEO14579 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPEO14579 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
COPEO14579 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
COPEO14579 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.65■■□□□ 1.06
COPEO14579 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms