Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 AL136116.3-201ENST00000402907 1138 ntBASIC19.34■□□□□ 0.69
NPIPB4C9JG80 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPB4C9JG80 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NPIPB4C9JG80 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
NPIPB4C9JG80 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.33■□□□□ 0.69
NPIPB4C9JG80 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPB4C9JG80 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.33■□□□□ 0.68
NPIPB4C9JG80 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPB4C9JG80 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPB4C9JG80 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.33■□□□□ 0.68
NPIPB4C9JG80 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NPIPB4C9JG80 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPB4C9JG80 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPB4C9JG80 OXCT2P1-201ENST00000447263 1535 ntBASIC19.32■□□□□ 0.68
NPIPB4C9JG80 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPB4C9JG80 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPB4C9JG80 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPB4C9JG80 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.32■□□□□ 0.68
NPIPB4C9JG80 AC010525.1-201ENST00000585559 441 ntBASIC19.32■□□□□ 0.68
NPIPB4C9JG80 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
NPIPB4C9JG80 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
NPIPB4C9JG80 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPB4C9JG80 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPB4C9JG80 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPB4C9JG80 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 OR7E47P-201ENST00000546390 1422 ntBASIC19.31■□□□□ 0.68
NPIPB4C9JG80 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NPIPB4C9JG80 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 SLC47A1P1-202ENST00000449666 945 ntBASIC19.3■□□□□ 0.68
NPIPB4C9JG80 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPB4C9JG80 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPB4C9JG80 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.29■□□□□ 0.68
NPIPB4C9JG80 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPB4C9JG80 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPB4C9JG80 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.29■□□□□ 0.68
NPIPB4C9JG80 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPB4C9JG80 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.29■□□□□ 0.68
NPIPB4C9JG80 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NPIPB4C9JG80 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPB4C9JG80 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPB4C9JG80 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPIPB4C9JG80 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NPIPB4C9JG80 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPB4C9JG80 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPB4C9JG80 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NPIPB4C9JG80 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPB4C9JG80 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPB4C9JG80 AC131212.1-201ENST00000613771 668 ntBASIC19.28■□□□□ 0.68
NPIPB4C9JG80 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.28■□□□□ 0.68
NPIPB4C9JG80 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPIPB4C9JG80 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPB4C9JG80 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPB4C9JG80 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPB4C9JG80 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPB4C9JG80 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPB4C9JG80 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPB4C9JG80 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPB4C9JG80 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPB4C9JG80 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPB4C9JG80 BX842568.3-201ENST00000418104 571 ntBASIC19.27■□□□□ 0.68
NPIPB4C9JG80 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms