Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A6A6NMZ7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A6A6NMZ7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.84■□□□□ 0.77
COL6A6A6NMZ7 HLA-L-211ENST00000482052 1765 ntBASIC19.84■□□□□ 0.77
COL6A6A6NMZ7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A6A6NMZ7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A6A6NMZ7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A6A6NMZ7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.84■□□□□ 0.77
COL6A6A6NMZ7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A6A6NMZ7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A6A6NMZ7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.84■□□□□ 0.77
COL6A6A6NMZ7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.84■□□□□ 0.77
COL6A6A6NMZ7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A6A6NMZ7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.83■□□□□ 0.77
COL6A6A6NMZ7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.83■□□□□ 0.77
COL6A6A6NMZ7 AC128676.1-201ENST00000454392 318 ntBASIC19.83■□□□□ 0.77
COL6A6A6NMZ7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.83■□□□□ 0.77
COL6A6A6NMZ7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.83■□□□□ 0.77
COL6A6A6NMZ7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL6A6A6NMZ7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL6A6A6NMZ7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COL6A6A6NMZ7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.83■□□□□ 0.77
COL6A6A6NMZ7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
COL6A6A6NMZ7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.83■□□□□ 0.76
COL6A6A6NMZ7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.83■□□□□ 0.76
COL6A6A6NMZ7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL6A6A6NMZ7 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 UNC93B5-201ENST00000530315 699 ntBASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 AC010536.3-201ENST00000620306 533 ntBASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL6A6A6NMZ7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL6A6A6NMZ7 AC144652.1-201ENST00000609974 1624 ntBASIC19.81■□□□□ 0.76
COL6A6A6NMZ7 LINC01529-204ENST00000636474 1715 ntBASIC19.81■□□□□ 0.76
COL6A6A6NMZ7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.81■□□□□ 0.76
COL6A6A6NMZ7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL6A6A6NMZ7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL6A6A6NMZ7 AC010331.1-201ENST00000611423 582 ntBASIC19.81■□□□□ 0.76
COL6A6A6NMZ7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.81■□□□□ 0.76
COL6A6A6NMZ7 AC005224.4-201ENST00000583262 1652 ntBASIC19.81■□□□□ 0.76
COL6A6A6NMZ7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.81■□□□□ 0.76
COL6A6A6NMZ7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL6A6A6NMZ7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL6A6A6NMZ7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL6A6A6NMZ7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
COL6A6A6NMZ7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL6A6A6NMZ7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.8■□□□□ 0.76
COL6A6A6NMZ7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.8■□□□□ 0.76
COL6A6A6NMZ7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.8■□□□□ 0.76
COL6A6A6NMZ7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.8■□□□□ 0.76
COL6A6A6NMZ7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL6A6A6NMZ7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COL6A6A6NMZ7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL6A6A6NMZ7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL6A6A6NMZ7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL6A6A6NMZ7 AC068338.2-201ENST00000563278 1430 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms