Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.19■■□□□ 1.14
TBC1D3BA6NDS4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.18■■□□□ 1.14
TBC1D3BA6NDS4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TBC1D3BA6NDS4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TBC1D3BA6NDS4 AC092068.2-201ENST00000590491 1708 ntBASIC22.18■■□□□ 1.14
TBC1D3BA6NDS4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TBC1D3BA6NDS4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.18■■□□□ 1.14
TBC1D3BA6NDS4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.18■■□□□ 1.14
TBC1D3BA6NDS4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.18■■□□□ 1.14
TBC1D3BA6NDS4 AC079140.4-201ENST00000507448 529 ntBASIC22.18■■□□□ 1.14
TBC1D3BA6NDS4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TBC1D3BA6NDS4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D3BA6NDS4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.17■■□□□ 1.14
TBC1D3BA6NDS4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D3BA6NDS4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D3BA6NDS4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D3BA6NDS4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D3BA6NDS4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.17■■□□□ 1.14
TBC1D3BA6NDS4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D3BA6NDS4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TBC1D3BA6NDS4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TBC1D3BA6NDS4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TBC1D3BA6NDS4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.16■■□□□ 1.14
TBC1D3BA6NDS4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TBC1D3BA6NDS4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.16■■□□□ 1.14
TBC1D3BA6NDS4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.16■■□□□ 1.14
TBC1D3BA6NDS4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TBC1D3BA6NDS4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
TBC1D3BA6NDS4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.16■■□□□ 1.14
TBC1D3BA6NDS4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D3BA6NDS4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TBC1D3BA6NDS4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.14■■□□□ 1.14
TBC1D3BA6NDS4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TBC1D3BA6NDS4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TBC1D3BA6NDS4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.14■■□□□ 1.13
TBC1D3BA6NDS4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TBC1D3BA6NDS4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
TBC1D3BA6NDS4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.14■■□□□ 1.13
TBC1D3BA6NDS4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TBC1D3BA6NDS4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 BID-214ENST00000617586 542 ntTSL 5 BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 AC009237.3-201ENST00000393279 1427 ntBASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
TBC1D3BA6NDS4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3BA6NDS4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3BA6NDS4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3BA6NDS4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.12■■□□□ 1.13
TBC1D3BA6NDS4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.12■■□□□ 1.13
TBC1D3BA6NDS4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3BA6NDS4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.12■■□□□ 1.13
TBC1D3BA6NDS4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.12■■□□□ 1.13
TBC1D3BA6NDS4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 CDCA4P2-201ENST00000441182 718 ntBASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 AC073111.5-205ENST00000641717 521 ntBASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms