Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.08■□□□□ 0.97
CNOT1A5YKK6 AC128676.1-201ENST00000454392 318 ntBASIC21.08■□□□□ 0.97
CNOT1A5YKK6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CNOT1A5YKK6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.08■□□□□ 0.97
CNOT1A5YKK6 MYC-209ENST00000641252 345 ntBASIC21.08■□□□□ 0.97
CNOT1A5YKK6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT1A5YKK6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNOT1A5YKK6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNOT1A5YKK6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNOT1A5YKK6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.08■□□□□ 0.96
CNOT1A5YKK6 UNC93B4-201ENST00000505679 747 ntBASIC21.08■□□□□ 0.96
CNOT1A5YKK6 RARRES2P4-201ENST00000514074 484 ntBASIC21.08■□□□□ 0.96
CNOT1A5YKK6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNOT1A5YKK6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNOT1A5YKK6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNOT1A5YKK6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT1A5YKK6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT1A5YKK6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.07■□□□□ 0.96
CNOT1A5YKK6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT1A5YKK6 AC010536.3-201ENST00000620306 533 ntBASIC21.07■□□□□ 0.96
CNOT1A5YKK6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT1A5YKK6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CNOT1A5YKK6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT1A5YKK6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CNOT1A5YKK6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CNOT1A5YKK6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT1A5YKK6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.07■□□□□ 0.96
CNOT1A5YKK6 AP001160.3-201ENST00000601484 763 ntBASIC21.07■□□□□ 0.96
CNOT1A5YKK6 AC005224.4-201ENST00000583262 1652 ntBASIC21.07■□□□□ 0.96
CNOT1A5YKK6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.06■□□□□ 0.96
CNOT1A5YKK6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 UNC93B5-201ENST00000530315 699 ntBASIC21.05■□□□□ 0.96
CNOT1A5YKK6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT1A5YKK6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.04■□□□□ 0.96
CNOT1A5YKK6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT1A5YKK6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT1A5YKK6 AC004687.1-201ENST00000579003 1625 ntBASIC21.04■□□□□ 0.96
CNOT1A5YKK6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.04■□□□□ 0.96
CNOT1A5YKK6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT1A5YKK6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT1A5YKK6 AC211429.1-201ENST00000415277 523 ntBASIC21.04■□□□□ 0.96
CNOT1A5YKK6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT1A5YKK6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT1A5YKK6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.04■□□□□ 0.96
CNOT1A5YKK6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT1A5YKK6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.03■□□□□ 0.96
CNOT1A5YKK6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.03■□□□□ 0.96
CNOT1A5YKK6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNOT1A5YKK6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.03■□□□□ 0.96
CNOT1A5YKK6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.03■□□□□ 0.96
CNOT1A5YKK6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.03■□□□□ 0.96
CNOT1A5YKK6 FAM210CP-201ENST00000445714 574 ntBASIC21.03■□□□□ 0.96
CNOT1A5YKK6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.03■□□□□ 0.96
CNOT1A5YKK6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT1A5YKK6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT1A5YKK6 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.03■□□□□ 0.96
CNOT1A5YKK6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT1A5YKK6 AC068338.2-201ENST00000563278 1430 ntBASIC21.02■□□□□ 0.96
CNOT1A5YKK6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT1A5YKK6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT1A5YKK6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT1A5YKK6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT1A5YKK6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.02■□□□□ 0.96
CNOT1A5YKK6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT1A5YKK6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.02■□□□□ 0.96
CNOT1A5YKK6 AC073912.3-201ENST00000624414 853 ntBASIC21.02■□□□□ 0.96
CNOT1A5YKK6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.02■□□□□ 0.96
CNOT1A5YKK6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.01■□□□□ 0.95
CNOT1A5YKK6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms