Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 C17orf82-201ENST00000623772 1530 ntBASIC21.68■■□□□ 1.06
CCDC189A1A4V9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC189A1A4V9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC189A1A4V9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC189A1A4V9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC189A1A4V9 AC087742.1-201ENST00000575880 1738 ntBASIC21.67■■□□□ 1.06
CCDC189A1A4V9 AC239859.2-201ENST00000444165 318 ntBASIC21.67■■□□□ 1.06
CCDC189A1A4V9 AC009299.2-201ENST00000482477 511 ntBASIC21.67■■□□□ 1.06
CCDC189A1A4V9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC189A1A4V9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC189A1A4V9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC189A1A4V9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC189A1A4V9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC189A1A4V9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CCDC189A1A4V9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC189A1A4V9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CCDC189A1A4V9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC189A1A4V9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC189A1A4V9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC189A1A4V9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC189A1A4V9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC189A1A4V9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC189A1A4V9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC189A1A4V9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC189A1A4V9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC189A1A4V9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CCDC189A1A4V9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC189A1A4V9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC189A1A4V9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.64■■□□□ 1.06
CCDC189A1A4V9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC189A1A4V9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC189A1A4V9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC189A1A4V9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC189A1A4V9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC189A1A4V9 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC189A1A4V9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.64■■□□□ 1.05
CCDC189A1A4V9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC189A1A4V9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC189A1A4V9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.64■■□□□ 1.05
CCDC189A1A4V9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC189A1A4V9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC189A1A4V9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC189A1A4V9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.63■■□□□ 1.05
CCDC189A1A4V9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 MIR6724-1-201ENST00000616420 92 ntBASIC21.63■■□□□ 1.05
CCDC189A1A4V9 MIR6724-2-201ENST00000616483 92 ntBASIC21.63■■□□□ 1.05
CCDC189A1A4V9 MIR6724-4-201ENST00000617390 92 ntBASIC21.63■■□□□ 1.05
CCDC189A1A4V9 MIR6724-3-201ENST00000622482 92 ntBASIC21.63■■□□□ 1.05
CCDC189A1A4V9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC189A1A4V9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC189A1A4V9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC189A1A4V9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC189A1A4V9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CCDC189A1A4V9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC189A1A4V9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC189A1A4V9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC189A1A4V9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC189A1A4V9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC189A1A4V9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC189A1A4V9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC189A1A4V9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC189A1A4V9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC189A1A4V9 AL499627.2-201ENST00000606283 725 ntBASIC21.61■■□□□ 1.05
CCDC189A1A4V9 AC092053.2-201ENST00000640557 1818 ntBASIC21.61■■□□□ 1.05
CCDC189A1A4V9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC189A1A4V9 AC139530.1-201ENST00000575312 1977 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms