Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC009086.3-201ENST00000623486 1008 ntBASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.14■□□□□ 0.65
TRDV1A0A1B0GX56 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 MIR4281-201ENST00000580852 62 ntBASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRDV1A0A1B0GX56 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRDV1A0A1B0GX56 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRDV1A0A1B0GX56 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 THA1P-201ENST00000590384 1145 ntBASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRDV1A0A1B0GX56 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 KRT18P24-201ENST00000344739 1156 ntBASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 AC129492.7-201ENST00000622992 756 ntBASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
TRDV1A0A1B0GX56 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRDV1A0A1B0GX56 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.08■□□□□ 0.65
TRDV1A0A1B0GX56 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.08■□□□□ 0.64
TRDV1A0A1B0GX56 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.08■□□□□ 0.64
TRDV1A0A1B0GX56 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRDV1A0A1B0GX56 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRDV1A0A1B0GX56 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRDV1A0A1B0GX56 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRDV1A0A1B0GX56 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.08■□□□□ 0.64
TRDV1A0A1B0GX56 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRDV1A0A1B0GX56 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms