Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV5-5A0A0J9YX44 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-5A0A0J9YX44 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBV5-5A0A0J9YX44 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBV5-5A0A0J9YX44 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV5-5A0A0J9YX44 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-5A0A0J9YX44 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRBV5-5A0A0J9YX44 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-5A0A0J9YX44 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBV5-5A0A0J9YX44 AL033527.3-201ENST00000566366 1196 ntBASIC18.89■□□□□ 0.61
TRBV5-5A0A0J9YX44 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-5A0A0J9YX44 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 C17orf82-201ENST00000623772 1530 ntBASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-5A0A0J9YX44 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-5A0A0J9YX44 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-5A0A0J9YX44 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-5A0A0J9YX44 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRBV5-5A0A0J9YX44 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.87■□□□□ 0.61
TRBV5-5A0A0J9YX44 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-5A0A0J9YX44 BX664725.1-201ENST00000438252 379 ntBASIC18.87■□□□□ 0.61
TRBV5-5A0A0J9YX44 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.87■□□□□ 0.61
TRBV5-5A0A0J9YX44 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.87■□□□□ 0.61
TRBV5-5A0A0J9YX44 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-5A0A0J9YX44 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 AL499627.2-201ENST00000606283 725 ntBASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 FEM1AP4-201ENST00000443167 1987 ntBASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-5A0A0J9YX44 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-5A0A0J9YX44 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
TRBV5-5A0A0J9YX44 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-5A0A0J9YX44 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-5A0A0J9YX44 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV5-5A0A0J9YX44 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV5-5A0A0J9YX44 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-5A0A0J9YX44 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRBV5-5A0A0J9YX44 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-5A0A0J9YX44 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV5-5A0A0J9YX44 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-5A0A0J9YX44 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-5A0A0J9YX44 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms