Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV4A0A0C4DH28 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV4A0A0C4DH28 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.58■□□□□ 0.08
TRGV4A0A0C4DH28 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV4A0A0C4DH28 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV4A0A0C4DH28 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 AC006455.2-201ENST00000429931 906 ntBASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 DUX4L19-201ENST00000557448 1267 ntBASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 AC133637.1-201ENST00000624115 1537 ntBASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV4A0A0C4DH28 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 AL512631.2-201ENST00000604634 923 ntBASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.56■□□□□ 0.08
TRGV4A0A0C4DH28 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 SYT6-210ENST00000641643 1587 ntBASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV4A0A0C4DH28 AC127496.7-201ENST00000625110 1798 ntBASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 AC131281.2-201ENST00000520478 145 ntBASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 AC242852.2-201ENST00000615738 1807 ntBASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV4A0A0C4DH28 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms