Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	CPS1	YJL172W	1731 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	NPL4	YBR170C	1743 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	YDL057W	YDL057W	987 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	RSM18	YER050C	417 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	YGR045C	YGR045C	363 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	HIS6	YIL020C	786 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	RNR2	YJL026W	1200 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	YLR101C	YLR101C	396 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	FMP41	YNL168C	780 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	NIP7	YPL211W	546 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	DCC1	YCL016C	1143 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	LEU1	YGL009C	2340 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	GGA1	YDR358W	1674 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	MSN4	YKL062W	1893 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	BAP2	YBR068C	1830 nt		5.55	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	EMP47	YFL048C	1338 nt		5.54	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	YAR047C	YAR047C	321 nt		5.54	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	RPS30A	YLR287C-A	192 nt		5.54	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	YLR462W	YLR462W	609 nt		5.54	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	WRS1	YOL097C	1299 nt		5.54	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	UBC11	YOR339C	471 nt		5.54	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	YPR202W	YPR202W	717 nt		5.54	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	YBR096W	YBR096W	693 nt		5.54	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	MRPS5	YBR251W	924 nt		5.54	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	RRN7	YJL025W	1545 nt		5.53	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	ADE12	YNL220W	1302 nt		5.53	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	EKI1	YDR147W	1605 nt		5.53	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	IDP1	YDL066W	1287 nt		5.53	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	MSW1	YDR268W	1140 nt		5.53	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	YER158W-A	YER158W-A	216 nt		5.53	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	YGR018C	YGR018C	330 nt		5.53	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	BET1	YIL004C	429 nt		5.53	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	ATX2	YOR079C	942 nt		5.53	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	MRPS9	YBR146W	837 nt		5.53	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	RPB5	YBR154C	648 nt		5.53	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	MDM38	YOL027C	1722 nt		5.53	□□□□□ -1.52
TY4B-P	A0A0B7P3V8	YDR444W	YDR444W	2064 nt		5.52	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	MET17	YLR303W	1335 nt		5.52	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	BSC1	YDL037C	987 nt		5.52	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	THG1	YGR024C	714 nt		5.52	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	VMA21	YGR105W	234 nt		5.52	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	CPR3	YML078W	549 nt		5.52	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	GIM5	YML094W	492 nt		5.52	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	PSF3	YOL146W	585 nt		5.52	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	CBP3	YPL215W	1008 nt		5.52	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	OPY2	YPR075C	1083 nt		5.52	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	PRP31	YGR091W	1485 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YEL077C	YEL077C	3834 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YDR366C	YDR366C	399 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	FAU1	YER183C	636 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YIL025C	YIL025C	375 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YKL023C-A	YKL023C-A	228 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	BET3	YKR068C	582 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YML012C-A	YML012C-A	378 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	MAK3	YPR051W	531 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	VTH1	YIL173W	4650 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	VTH2	YJL222W	4650 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	TIP20	YGL145W	2106 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YML082W	YML082W	1950 nt		5.51	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	ZRC1	YMR243C	1329 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	FAR10	YLR238W	1437 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	TDA11	YHR159W	1515 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	TRK2	YKR050W	2670 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	CDC4	YFL009W	2340 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	ARG82	YDR173C	1068 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	ATG27	YJL178C	816 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YLR125W	YLR125W	411 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	MRPL44	YMR225C	297 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	TSR4	YOL022C	1227 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	ETR1	YBR026C	1143 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	CAF20	YOR276W	486 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YGR125W	YGR125W	3111 nt		5.5	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	SIF2	YBR103W	1608 nt		5.49	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YHR213W	YHR213W	597 nt		5.49	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YKL063C	YKL063C	504 nt		5.49	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YKL177W	YKL177W	339 nt		5.49	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YAR062W	YAR062W	597 nt		5.49	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	SEC22	YLR268W	645 nt		5.49	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	RHO5	YNL180C	996 nt		5.49	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YPR074W-A	YPR074W-A	171 nt		5.49	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	UBX3	YDL091C	1368 nt		5.49	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	QDR3	YBR043C	2070 nt		5.49	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	SAS10	YDL153C	1833 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	RCK2	YLR248W	1833 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	DOA1	YKL213C	2148 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	SMF2	YHR050W	1650 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	ARG4	YHR018C	1392 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	RTT106	YNL206C	1368 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	SUR2	YDR297W	1050 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	SEC20	YDR498C	1152 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	MIG3	YER028C	1185 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	GVP36	YIL041W	981 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	YNK1	YKL067W	462 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	TRE1	YPL176C	2352 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	RAD16	YBR114W	2373 nt		5.48	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	ASM4	YDL088C	1587 nt		5.47	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	UBC1	YDR177W	648 nt		5.47	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	TMA20	YER007C-A	546 nt		5.47	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	ARC1	YGL105W	1131 nt		5.47	□□□□□ -1.53
TY4B-P	A0A0B7P3V8	DSE2	YHR143W	978 nt		5.47	□□□□□ -1.53

Retrieved 100 of 7,029 protein–RNA pairs in 116.1 ms