Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 AC026310.3-201ENST00000625186 2373 ntBASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV3A0A0B4J244 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TRAV3A0A0B4J244 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 AC006455.2-201ENST00000429931 906 ntBASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV3A0A0B4J244 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 KRT16P3-201ENST00000439127 1283 ntBASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV3A0A0B4J244 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 PKD1P6-201ENST00000343738 4769 ntBASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV3A0A0B4J244 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV3A0A0B4J244 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV3A0A0B4J244 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV3A0A0B4J244 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV3A0A0B4J244 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 223.7 ms