Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV1-2A0A0B4J238 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV1-2A0A0B4J238 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV1-2A0A0B4J238 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRAV1-2A0A0B4J238 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV1-2A0A0B4J238 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV1-2A0A0B4J238 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV1-2A0A0B4J238 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV1-2A0A0B4J238 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.89■□□□□ 0.62
TRAV1-2A0A0B4J238 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV1-2A0A0B4J238 AL121603.2-201ENST00000557373 2117 ntBASIC18.89■□□□□ 0.62
TRAV1-2A0A0B4J238 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.89■□□□□ 0.62
TRAV1-2A0A0B4J238 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV1-2A0A0B4J238 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
TRAV1-2A0A0B4J238 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV1-2A0A0B4J238 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV1-2A0A0B4J238 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRAV1-2A0A0B4J238 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV1-2A0A0B4J238 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAV1-2A0A0B4J238 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRAV1-2A0A0B4J238 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV1-2A0A0B4J238 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 RARRES2P2-201ENST00000394842 485 ntBASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 AC074183.2-201ENST00000623112 922 ntBASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 AF106564.1-201ENST00000607058 2553 ntBASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV1-2A0A0B4J238 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms