Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-1A0A0A6YYK1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-1A0A0A6YYK1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 FP325331.1-202ENST00000623531 1380 ntBASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-1A0A0A6YYK1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 AC009086.3-201ENST00000623486 1008 ntBASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-1A0A0A6YYK1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV8-1A0A0A6YYK1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV8-1A0A0A6YYK1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 AC244015.2-201ENST00000616358 1861 ntBASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 AC004687.1-201ENST00000579003 1625 ntBASIC16.45■□□□□ 0.22
TRAV8-1A0A0A6YYK1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms