Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 AL356441.2-201ENST00000443009 864 ntBASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 C11orf96-202ENST00000528572 1834 ntBASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 FBXW4P1-201ENST00000426721 2239 ntBASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 AL356740.2-201ENST00000601559 647 ntBASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 AC092053.2-201ENST00000640557 1818 ntBASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms