Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 pRNA.6-201ENST00000610482 90 ntBASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 pRNA.5-201ENST00000612139 90 ntBASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 pRNA.11-201ENST00000618423 90 ntBASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 pRNA.13-201ENST00000619112 90 ntBASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 SERBP1P1-201ENST00000396021 1160 ntBASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 AL136162.1-201ENST00000607711 1078 ntBASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV26-1A0A087WT03 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 MIR3181-201ENST00000578512 73 ntBASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV26-1A0A087WT03 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 PBX2P1-201ENST00000493219 1291 ntBASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 AC135279.3-201ENST00000610945 1311 ntBASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV26-1A0A087WT03 DUSP8P3-201ENST00000399571 1760 ntBASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 AL139246.5-201ENST00000606645 996 ntBASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 AL138724.1-201ENST00000606771 1088 ntBASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 AC110285.6-201ENST00000617652 491 ntBASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 LINC00565-201ENST00000562710 2331 ntBASIC15.59■□□□□ 0.09
TRAV26-1A0A087WT03 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.58■□□□□ 0.09
TRAV26-1A0A087WT03 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV26-1A0A087WT03 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV26-1A0A087WT03 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.58■□□□□ 0.09
TRAV26-1A0A087WT03 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV26-1A0A087WT03 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV26-1A0A087WT03 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.58■□□□□ 0.09
TRAV26-1A0A087WT03 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
TRAV26-1A0A087WT03 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV26-1A0A087WT03 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV26-1A0A087WT03 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRAV26-1A0A087WT03 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV26-1A0A087WT03 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV26-1A0A087WT03 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms