Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV30A0A087WSZ9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAV30A0A087WSZ9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 CA15P2-201ENST00000611168 834 ntBASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV30A0A087WSZ9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TRAV30A0A087WSZ9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV30A0A087WSZ9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV30A0A087WSZ9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAV30A0A087WSZ9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 KRT16P3-201ENST00000439127 1283 ntBASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 UNC93B8-201ENST00000511903 705 ntBASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
TRAV30A0A087WSZ9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV30A0A087WSZ9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV30A0A087WSZ9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV30A0A087WSZ9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV30A0A087WSZ9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV30A0A087WSZ9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV30A0A087WSZ9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV30A0A087WSZ9 AL356740.2-201ENST00000601559 647 ntBASIC16.99■□□□□ 0.31
TRAV30A0A087WSZ9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV30A0A087WSZ9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV30A0A087WSZ9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV30A0A087WSZ9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms