Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SLC1A1P43005 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 ZNF221-202ENST00000587682 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 AC099521.2-201ENST00000619354 2036 ntBASIC13.13□□□□□ -0.31
SLC1A1P43005 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 RNF4-201ENST00000314289 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC13.13□□□□□ -0.31
SLC1A1P43005 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 UBE2G1-201ENST00000396981 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 A2M-AS1-201ENST00000499762 2192 ntTSL 2 BASIC13.13□□□□□ -0.31
SLC1A1P43005 AC019294.1-202ENST00000566174 2071 ntBASIC13.12□□□□□ -0.31
SLC1A1P43005 RHCG-201ENST00000268122 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 DDX3P1-201ENST00000418231 1950 ntBASIC13.12□□□□□ -0.31
SLC1A1P43005 SLCO2A1-201ENST00000310926 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SLC1A1P43005 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 ASTN2-203ENST00000341734 1757 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 AC100868.1-201ENST00000262283 2413 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SLC1A1P43005 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 CD1E-208ENST00000368163 1678 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 WDR70-201ENST00000265107 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 LDLRAD1-204ENST00000545928 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 AL359532.1-201ENST00000608729 1560 ntBASIC13.12□□□□□ -0.31
SLC1A1P43005 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 HINFP-204ENST00000527410 1466 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC1A1P43005 AL390838.1-201ENST00000423515 2007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 CELF2-210ENST00000631816 1803 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC1A1P43005 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 RBP4-203ENST00000371469 814 ntTSL 5 BASIC13.12□□□□□ -0.31
SLC1A1P43005 CLPSL1-201ENST00000373861 602 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SLC1A1P43005 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.12□□□□□ -0.31
SLC1A1P43005 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC13.12□□□□□ -0.31
SLC1A1P43005 C10orf71-AS1-201ENST00000437677 753 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC1A1P43005 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC1A1P43005 AC009305.1-201ENST00000449780 368 ntTSL 2 BASIC13.12□□□□□ -0.31
SLC1A1P43005 AC026470.1-201ENST00000478038 846 ntBASIC13.12□□□□□ -0.31
SLC1A1P43005 RN7SL363P-201ENST00000482412 273 ntBASIC13.12□□□□□ -0.31
SLC1A1P43005 RPSAP70-201ENST00000504462 864 ntBASIC13.12□□□□□ -0.31
SLC1A1P43005 LINC02105-201ENST00000504552 1003 ntTSL 3 BASIC13.12□□□□□ -0.31
SLC1A1P43005 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC13.12□□□□□ -0.31
SLC1A1P43005 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC13.12□□□□□ -0.31
SLC1A1P43005 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
SLC1A1P43005 KNOP1P1-201ENST00000542108 989 ntBASIC13.12□□□□□ -0.31
SLC1A1P43005 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.12□□□□□ -0.31
SLC1A1P43005 AC055811.3-201ENST00000584952 686 ntBASIC13.12□□□□□ -0.31
SLC1A1P43005 GGNBP1-204ENST00000613113 887 ntBASIC13.12□□□□□ -0.31
SLC1A1P43005 AC105020.5-201ENST00000614810 423 ntBASIC13.12□□□□□ -0.31
SLC1A1P43005 AP003419.4-201ENST00000616071 517 ntBASIC13.12□□□□□ -0.31
SLC1A1P43005 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 ABHD17B-201ENST00000333421 2614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 PITX2-212ENST00000614423 1866 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
SLC1A1P43005 TTYH2-201ENST00000269346 3490 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 SLC25A14-213ENST00000543953 1403 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SLC1A1P43005 GRAMD1B-201ENST00000322282 2571 ntTSL 5 BASIC13.12□□□□□ -0.31
SLC1A1P43005 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SLC1A1P43005 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC13.12□□□□□ -0.31
SLC1A1P43005 SLC12A8-202ENST00000430155 2831 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
SLC1A1P43005 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SLC1A1P43005 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SLC1A1P43005 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 SCAMP1-207ENST00000621999 4509 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 AC007277.1-201ENST00000428156 2189 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 PIK3C3-210ENST00000589056 2074 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 ATL2-206ENST00000419554 2335 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 DGCR11-201ENST00000609958 2214 ntBASIC13.11□□□□□ -0.31
SLC1A1P43005 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC13.11□□□□□ -0.31
SLC1A1P43005 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SLC1A1P43005 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 C22orf15-203ENST00000402217 829 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms