Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 HSPA4-201ENST00000304858 4825 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 AC025538.1-201ENST00000510707 1486 ntBASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 AC015819.3-201ENST00000624305 2674 ntBASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 FRMD6-204ENST00000553556 1679 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 ELP4-225ENST00000640533 1801 ntTSL 5 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 GJB1-202ENST00000374022 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 AL121574.1-201ENST00000415890 419 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 HLA-DRB6-202ENST00000437183 1090 ntBASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 POLR2LP1-206ENST00000444785 187 ntBASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 AP001453.2-201ENST00000544553 391 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 SNORD55-201ENST00000581525 80 ntBASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 RN7SL202P-201ENST00000584410 262 ntBASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 AC254633.1-201ENST00000606790 345 ntBASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 MIR1914-201ENST00000607800 80 ntBASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 RPL4P6-201ENST00000438116 1304 ntBASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 ANGEL1-205ENST00000557179 1427 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPA3F8WFD2 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 DOCK10-201ENST00000258390 7260 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 LIF-201ENST00000249075 3969 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 AC012313.8-201ENST00000595059 5402 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 MIR766-201ENST00000390223 111 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 PLAC9P1-203ENST00000440031 223 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 AKIRIN1P2-201ENST00000440655 570 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 VDAC1P13-201ENST00000447826 859 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 LDHAL6CP-201ENST00000502352 1142 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 AP000753.1-201ENST00000542805 573 ntTSL 4 BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms