Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 WDR47-203ENST00000369962 4199 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 OBP2A-202ENST00000342114 607 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 CHIAP2-202ENST00000449687 669 ntTSL 3 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 RN7SL677P-201ENST00000466970 319 ntBASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 AC113340.1-201ENST00000475257 636 ntBASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 ALDOAP1-201ENST00000491506 1078 ntBASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 AC106872.8-201ENST00000507651 684 ntBASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 AC092284.1-201ENST00000511386 1289 ntBASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 RAB42P1-201ENST00000555078 316 ntBASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 CYP4F10P-201ENST00000589560 752 ntBASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 AC100793.3-201ENST00000592440 719 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 AC112220.4-201ENST00000604982 1263 ntBASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 RN7SL827P-201ENST00000607480 288 ntBASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 CDIPT-AS1-203ENST00000638164 713 ntBASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 TRIM80P-201ENST00000455685 2848 ntBASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 CMTR2-202ENST00000434935 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 CETP-202ENST00000379780 1537 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 TRIM40-206ENST00000376724 2006 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 OR13A1-202ENST00000536058 2023 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 CASP2-203ENST00000392925 616 ntTSL 3 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 HNRNPA1P19-201ENST00000405292 370 ntBASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 Z84721.1-201ENST00000438841 372 ntBASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 RN7SL173P-201ENST00000461853 292 ntBASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 MAF1-204ENST00000532522 1098 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 ALOX12P1-201ENST00000579299 1229 ntBASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 AC112702.1-201ENST00000623712 366 ntBASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 AL109976.1-201ENST00000621919 5678 ntBASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 FAM90A22P-201ENST00000400142 1395 ntBASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 TUB-202ENST00000305253 6420 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NPIPA3F8WFD2 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms