Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 AC116036.2-201ENST00000607592 462 ntBASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 NUPL2-201ENST00000258742 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 AGA-201ENST00000264595 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NPIPA3F8WFD2 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPA3F8WFD2 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 SERPINB8P1-201ENST00000401898 377 ntBASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 RNA5SP407-201ENST00000410275 110 ntBASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 TUBB8P9-201ENST00000422534 1276 ntBASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 TUBB8P10-201ENST00000430210 1279 ntBASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 RN7SL479P-201ENST00000472003 300 ntBASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 CDK2AP1-204ENST00000538446 1161 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 HP-215ENST00000569639 568 ntTSL 4 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 PRKN-210ENST00000612540 603 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 LINC02348-201ENST00000618724 489 ntTSL 4 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 PAX6-217ENST00000481563 1587 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 AL807752.1-201ENST00000395082 1322 ntBASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 TUBA3GP-201ENST00000410028 1325 ntBASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 SEMA6D-201ENST00000316364 6099 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPA3F8WFD2 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
NPIPA3F8WFD2 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms