Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC13.18□□□□□ -0.3
MTHFRP42898 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 PALM2-201ENST00000314527 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 CASC4P1-201ENST00000456608 1312 ntBASIC13.18□□□□□ -0.3
MTHFRP42898 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 SLC29A3-201ENST00000373189 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
MTHFRP42898 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 RGPD4-AS1-202ENST00000457647 1792 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC13.18□□□□□ -0.3
MTHFRP42898 FOLR1-201ENST00000312293 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC13.18□□□□□ -0.3
MTHFRP42898 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC13.18□□□□□ -0.3
MTHFRP42898 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC13.18□□□□□ -0.3
MTHFRP42898 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC13.18□□□□□ -0.3
MTHFRP42898 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC13.18□□□□□ -0.3
MTHFRP42898 AL356479.1-202ENST00000456933 714 ntTSL 3 BASIC13.18□□□□□ -0.3
MTHFRP42898 AC106872.8-201ENST00000507651 684 ntBASIC13.18□□□□□ -0.3
MTHFRP42898 AL355075.5-201ENST00000553568 890 ntBASIC13.18□□□□□ -0.3
MTHFRP42898 MIR4725-201ENST00000581700 90 ntBASIC13.18□□□□□ -0.3
MTHFRP42898 snoZ6.3-201ENST00000583496 76 ntBASIC13.18□□□□□ -0.3
MTHFRP42898 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 NOP16-210ENST00000619979 963 ntTSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 AC025278.3-201ENST00000636139 796 ntBASIC13.18□□□□□ -0.3
MTHFRP42898 TNNT3-216ENST00000641119 941 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
MTHFRP42898 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
MTHFRP42898 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 HNRNPC-204ENST00000449098 1599 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.18□□□□□ -0.3
MTHFRP42898 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC13.18□□□□□ -0.3
MTHFRP42898 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MTHFRP42898 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
MTHFRP42898 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 AC004585.2-201ENST00000624090 1473 ntBASIC13.17□□□□□ -0.3
MTHFRP42898 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 AL450468.2-201ENST00000565955 1889 ntBASIC13.17□□□□□ -0.3
MTHFRP42898 SERINC3-201ENST00000255175 1726 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
MTHFRP42898 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
MTHFRP42898 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
MTHFRP42898 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.17□□□□□ -0.3
MTHFRP42898 TTLL1-202ENST00000331018 1185 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
MTHFRP42898 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC13.17□□□□□ -0.3
MTHFRP42898 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
MTHFRP42898 LDHAL6FP-201ENST00000405916 1082 ntBASIC13.17□□□□□ -0.3
MTHFRP42898 ACTG1P10-201ENST00000428275 1082 ntBASIC13.17□□□□□ -0.3
MTHFRP42898 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC13.17□□□□□ -0.3
MTHFRP42898 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC13.17□□□□□ -0.3
MTHFRP42898 C10orf71-AS1-201ENST00000437677 753 ntTSL 2 BASIC13.17□□□□□ -0.3
MTHFRP42898 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC13.17□□□□□ -0.3
MTHFRP42898 AC103925.1-201ENST00000453155 771 ntTSL 3 BASIC13.17□□□□□ -0.3
MTHFRP42898 RN7SL521P-201ENST00000488398 297 ntBASIC13.17□□□□□ -0.3
MTHFRP42898 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC13.17□□□□□ -0.3
MTHFRP42898 AC096713.1-201ENST00000514650 978 ntBASIC13.17□□□□□ -0.3
MTHFRP42898 RBPMS-205ENST00000517860 1076 ntTSL 2 BASIC13.17□□□□□ -0.3
MTHFRP42898 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC13.17□□□□□ -0.3
MTHFRP42898 STAMBP-211ENST00000536064 845 ntTSL 5 BASIC13.17□□□□□ -0.3
MTHFRP42898 AP002383.2-201ENST00000545768 675 ntBASIC13.17□□□□□ -0.3
MTHFRP42898 AL391152.1-202ENST00000551408 624 ntTSL 3 BASIC13.17□□□□□ -0.3
MTHFRP42898 IGHV1OR16-2-201ENST00000564937 349 ntBASIC13.17□□□□□ -0.3
MTHFRP42898 AC140658.2-201ENST00000566360 348 ntBASIC13.17□□□□□ -0.3
MTHFRP42898 TCF4-AS1-201ENST00000587660 396 ntTSL 2 BASIC13.17□□□□□ -0.3
MTHFRP42898 AC068134.4-201ENST00000613365 122 ntBASIC13.17□□□□□ -0.3
MTHFRP42898 MIR4726-201ENST00000615971 58 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms