Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC004466.2-201ENST00000614749 516 ntBASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 RASSF8-203ENST00000405154 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 TPD52L3-203ENST00000381428 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 LINC01227-205ENST00000567317 1338 ntTSL 2 BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 OR10N1P-203ENST00000641736 1305 ntBASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
NPIPA3F8WFD2 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 AC010900.1-201ENST00000449849 1296 ntBASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 CMC2-202ENST00000486645 766 ntTSL 3 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 CCNL2P1-201ENST00000512846 969 ntBASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 MST1L-204ENST00000545160 559 ntTSL 4 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 AC005332.2-201ENST00000590010 930 ntBASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 TRMT112P6-201ENST00000599234 372 ntBASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 RPS9-213ENST00000626547 476 ntTSL 2 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 CASP16P-204ENST00000635032 809 ntBASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 RUBCNL-208ENST00000429979 3979 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 PISD-203ENST00000397500 2194 ntTSL 5 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 IYD-208ENST00000500320 2158 ntTSL 2 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPA3F8WFD2 AL365259.1-204ENST00000606001 2635 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPA3F8WFD2 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms