Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PCDHA9Q9Y5H5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 AL512631.2-201ENST00000604634 923 ntBASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 AC009086.3-201ENST00000623486 1008 ntBASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 AC241377.3-202ENST00000626088 1088 ntBASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 AC241585.3-202ENST00000628937 1088 ntBASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 AC245100.8-202ENST00000629247 1058 ntBASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PCDHA9Q9Y5H5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 AC026310.3-201ENST00000625186 2373 ntBASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA9Q9Y5H5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PCDHA9Q9Y5H5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHA9Q9Y5H5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PCDHA9Q9Y5H5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA9Q9Y5H5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA9Q9Y5H5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA9Q9Y5H5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA9Q9Y5H5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA9Q9Y5H5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHA9Q9Y5H5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHA9Q9Y5H5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHA9Q9Y5H5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA9Q9Y5H5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA9Q9Y5H5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
PCDHA9Q9Y5H5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms