Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PCDHGA9Q9Y5G4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGA9Q9Y5G4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA9Q9Y5G4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGA9Q9Y5G4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA9Q9Y5G4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCDHGA9Q9Y5G4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA9Q9Y5G4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA9Q9Y5G4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA9Q9Y5G4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA9Q9Y5G4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA9Q9Y5G4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA9Q9Y5G4 AC006015.1-201ENST00000429970 570 ntBASIC20.4■□□□□ 0.86
PCDHGA9Q9Y5G4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHGA9Q9Y5G4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGA9Q9Y5G4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA9Q9Y5G4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGA9Q9Y5G4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGA9Q9Y5G4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA9Q9Y5G4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA9Q9Y5G4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA9Q9Y5G4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA9Q9Y5G4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.39■□□□□ 0.86
PCDHGA9Q9Y5G4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA9Q9Y5G4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA9Q9Y5G4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA9Q9Y5G4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHGA9Q9Y5G4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA9Q9Y5G4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHGA9Q9Y5G4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA9Q9Y5G4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 AC080038.1-201ENST00000611274 1154 ntBASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA9Q9Y5G4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
PCDHGA9Q9Y5G4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA9Q9Y5G4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA9Q9Y5G4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA9Q9Y5G4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA9Q9Y5G4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCDHGA9Q9Y5G4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
PCDHGA9Q9Y5G4 HLA-L-209ENST00000420110 1011 ntBASIC20.37■□□□□ 0.85
PCDHGA9Q9Y5G4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHGA9Q9Y5G4 TPRG1LP1-201ENST00000598702 760 ntBASIC20.37■□□□□ 0.85
PCDHGA9Q9Y5G4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA9Q9Y5G4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA9Q9Y5G4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA9Q9Y5G4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 AC016769.1-201ENST00000409132 1010 ntBASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 AC137761.2-201ENST00000561729 223 ntBASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 AC145350.3-201ENST00000569033 163 ntBASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 ABCB10P4-201ENST00000566803 2184 ntBASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA9Q9Y5G4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms