Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC4Q9Y5F7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 ZNRF2P3-201ENST00000424200 374 ntBASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 AC010141.3-201ENST00000456659 717 ntBASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHGC4Q9Y5F7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 AC087239.1-201ENST00000622671 572 ntBASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC4Q9Y5F7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC4Q9Y5F7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHGC4Q9Y5F7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
PCDHGC4Q9Y5F7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC4Q9Y5F7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC4Q9Y5F7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC4Q9Y5F7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC4Q9Y5F7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC4Q9Y5F7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.02■■□□□ 1.12
PCDHGC4Q9Y5F7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC4Q9Y5F7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHGC4Q9Y5F7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PCDHGC4Q9Y5F7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PCDHGC4Q9Y5F7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC4Q9Y5F7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC4Q9Y5F7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC4Q9Y5F7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC4Q9Y5F7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHGC4Q9Y5F7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC4Q9Y5F7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 ESRRAP2-201ENST00000418437 1549 ntBASIC22■■□□□ 1.11
PCDHGC4Q9Y5F7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC4Q9Y5F7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC4Q9Y5F7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC4Q9Y5F7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC4Q9Y5F7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGC4Q9Y5F7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PCDHGC4Q9Y5F7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.99■■□□□ 1.11
PCDHGC4Q9Y5F7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
PCDHGC4Q9Y5F7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDHGC4Q9Y5F7 AC137767.1-201ENST00000602918 1920 ntBASIC21.99■■□□□ 1.11
PCDHGC4Q9Y5F7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHGC4Q9Y5F7 OXCT2P1-201ENST00000447263 1535 ntBASIC21.99■■□□□ 1.11
PCDHGC4Q9Y5F7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 AC233723.2-201ENST00000623798 2106 ntBASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms