Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 YBX1P1-201ENST00000445822 960 ntBASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 AL117328.2-201ENST00000624617 1940 ntBASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHB11Q9Y5F2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 AC233723.2-201ENST00000623798 2106 ntBASIC21.34■■□□□ 1.01
PCDHB11Q9Y5F2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 TSPY26P-201ENST00000476365 1326 ntBASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB11Q9Y5F2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.33■■□□□ 1
PCDHB11Q9Y5F2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHB11Q9Y5F2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDHB11Q9Y5F2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.32■■□□□ 1
PCDHB11Q9Y5F2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PCDHB11Q9Y5F2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB11Q9Y5F2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB11Q9Y5F2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB11Q9Y5F2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB11Q9Y5F2 AC090192.1-201ENST00000517740 490 ntBASIC21.32■■□□□ 1
PCDHB11Q9Y5F2 RARRES2P11-201ENST00000635158 484 ntBASIC21.32■■□□□ 1
PCDHB11Q9Y5F2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB11Q9Y5F2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB11Q9Y5F2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 C1orf229-201ENST00000623686 2258 ntBASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 SLC47A1P1-202ENST00000449666 945 ntBASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 AC022517.1-201ENST00000592429 346 ntBASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 AL358852.1-201ENST00000623174 1268 ntBASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHB11Q9Y5F2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB11Q9Y5F2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 OR2I1P-207ENST00000453522 948 ntBASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms