Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
NRXN3Q9Y4C0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NRXN3Q9Y4C0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
NRXN3Q9Y4C0 TSPY6P-201ENST00000448518 926 ntBASIC31.12■■■□□ 2.57
NRXN3Q9Y4C0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NRXN3Q9Y4C0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
NRXN3Q9Y4C0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NRXN3Q9Y4C0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC31.11■■■□□ 2.57
NRXN3Q9Y4C0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NRXN3Q9Y4C0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
NRXN3Q9Y4C0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
NRXN3Q9Y4C0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC31.11■■■□□ 2.57
NRXN3Q9Y4C0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
NRXN3Q9Y4C0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC31.1■■■□□ 2.57
NRXN3Q9Y4C0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC31.1■■■□□ 2.57
NRXN3Q9Y4C0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
NRXN3Q9Y4C0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
NRXN3Q9Y4C0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NRXN3Q9Y4C0 CNN2P6-201ENST00000439038 900 ntBASIC31.09■■■□□ 2.57
NRXN3Q9Y4C0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NRXN3Q9Y4C0 CD99P1-205ENST00000527459 561 ntBASIC31.09■■■□□ 2.57
NRXN3Q9Y4C0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
NRXN3Q9Y4C0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC31.09■■■□□ 2.57
NRXN3Q9Y4C0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC31.09■■■□□ 2.57
NRXN3Q9Y4C0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NRXN3Q9Y4C0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.08■■■□□ 2.57
NRXN3Q9Y4C0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC31.08■■■□□ 2.57
NRXN3Q9Y4C0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
NRXN3Q9Y4C0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC31.08■■■□□ 2.57
NRXN3Q9Y4C0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
NRXN3Q9Y4C0 KRT18P6-201ENST00000555540 1265 ntBASIC31.08■■■□□ 2.57
NRXN3Q9Y4C0 AL138781.1-201ENST00000566567 1274 ntBASIC31.08■■■□□ 2.57
NRXN3Q9Y4C0 AL121832.2-201ENST00000610979 668 ntBASIC31.08■■■□□ 2.57
NRXN3Q9Y4C0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NRXN3Q9Y4C0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
NRXN3Q9Y4C0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC31.07■■■□□ 2.56
NRXN3Q9Y4C0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NRXN3Q9Y4C0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC31.07■■■□□ 2.56
NRXN3Q9Y4C0 LINC00543-201ENST00000567234 1845 ntBASIC31.07■■■□□ 2.56
NRXN3Q9Y4C0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
NRXN3Q9Y4C0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
NRXN3Q9Y4C0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
NRXN3Q9Y4C0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC31.06■■■□□ 2.56
NRXN3Q9Y4C0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC31.06■■■□□ 2.56
NRXN3Q9Y4C0 MYCNOS-205ENST00000641950 531 ntBASIC31.06■■■□□ 2.56
NRXN3Q9Y4C0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
NRXN3Q9Y4C0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC31.06■■■□□ 2.56
NRXN3Q9Y4C0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 MDK-213ENST00000617138 635 ntTSL 2 BASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 AC231657.2-201ENST00000624556 255 ntBASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 AL353803.4-201ENST00000565882 1934 ntBASIC31.05■■■□□ 2.56
NRXN3Q9Y4C0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC31.04■■■□□ 2.56
NRXN3Q9Y4C0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NRXN3Q9Y4C0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NRXN3Q9Y4C0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NRXN3Q9Y4C0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC31.04■■■□□ 2.56
NRXN3Q9Y4C0 OXCT2P1-201ENST00000447263 1535 ntBASIC31.04■■■□□ 2.56
NRXN3Q9Y4C0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NRXN3Q9Y4C0 AC069152.1-201ENST00000438030 544 ntBASIC31.04■■■□□ 2.56
NRXN3Q9Y4C0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC31.04■■■□□ 2.56
NRXN3Q9Y4C0 AC066615.1-201ENST00000640911 628 ntBASIC31.04■■■□□ 2.56
NRXN3Q9Y4C0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NRXN3Q9Y4C0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
NRXN3Q9Y4C0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.03■■■□□ 2.56
NRXN3Q9Y4C0 TMEM191A-211ENST00000637163 1067 ntBASIC31.03■■■□□ 2.56
NRXN3Q9Y4C0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
NRXN3Q9Y4C0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC31.03■■■□□ 2.56
NRXN3Q9Y4C0 TSPY20P-201ENST00000450910 630 ntBASIC31.02■■■□□ 2.56
NRXN3Q9Y4C0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC31.02■■■□□ 2.56
NRXN3Q9Y4C0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
NRXN3Q9Y4C0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
NRXN3Q9Y4C0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC31.02■■■□□ 2.56
NRXN3Q9Y4C0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
NRXN3Q9Y4C0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
NRXN3Q9Y4C0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC31.02■■■□□ 2.56
NRXN3Q9Y4C0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.02■■■□□ 2.56
NRXN3Q9Y4C0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
NRXN3Q9Y4C0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
NRXN3Q9Y4C0 DUSP8P3-201ENST00000399571 1760 ntBASIC31.01■■■□□ 2.55
NRXN3Q9Y4C0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.01■■■□□ 2.55
NRXN3Q9Y4C0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC31.01■■■□□ 2.55
NRXN3Q9Y4C0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
NRXN3Q9Y4C0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
NRXN3Q9Y4C0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC31■■■□□ 2.55
NRXN3Q9Y4C0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC31■■■□□ 2.55
NRXN3Q9Y4C0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC31■■■□□ 2.55
NRXN3Q9Y4C0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC31■■■□□ 2.55
NRXN3Q9Y4C0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC31■■■□□ 2.55
NRXN3Q9Y4C0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
NRXN3Q9Y4C0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms