Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SATB2Q9UPW6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SATB2Q9UPW6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SATB2Q9UPW6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SATB2Q9UPW6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.27■■□□□ 1
SATB2Q9UPW6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.27■■□□□ 1
SATB2Q9UPW6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.27■■□□□ 1
SATB2Q9UPW6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.27■□□□□ 0.99
SATB2Q9UPW6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SATB2Q9UPW6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.27■□□□□ 0.99
SATB2Q9UPW6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SATB2Q9UPW6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
SATB2Q9UPW6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.27■□□□□ 0.99
SATB2Q9UPW6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SATB2Q9UPW6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SATB2Q9UPW6 AC079834.2-201ENST00000609776 1949 ntBASIC21.26■□□□□ 0.99
SATB2Q9UPW6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SATB2Q9UPW6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SATB2Q9UPW6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SATB2Q9UPW6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.26■□□□□ 0.99
SATB2Q9UPW6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.26■□□□□ 0.99
SATB2Q9UPW6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SATB2Q9UPW6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SATB2Q9UPW6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.26■□□□□ 0.99
SATB2Q9UPW6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SATB2Q9UPW6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 HLA-L-209ENST00000420110 1011 ntBASIC21.25■□□□□ 0.99
SATB2Q9UPW6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 AC105233.4-201ENST00000642045 216 ntBASIC21.25■□□□□ 0.99
SATB2Q9UPW6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.25■□□□□ 0.99
SATB2Q9UPW6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.24■□□□□ 0.99
SATB2Q9UPW6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SATB2Q9UPW6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SATB2Q9UPW6 AP005435.1-201ENST00000529293 1178 ntBASIC21.23■□□□□ 0.99
SATB2Q9UPW6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.23■□□□□ 0.99
SATB2Q9UPW6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.23■□□□□ 0.99
SATB2Q9UPW6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SATB2Q9UPW6 FP325331.1-202ENST00000623531 1380 ntBASIC21.23■□□□□ 0.99
SATB2Q9UPW6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SATB2Q9UPW6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.22■□□□□ 0.99
SATB2Q9UPW6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SATB2Q9UPW6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SATB2Q9UPW6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.22■□□□□ 0.99
SATB2Q9UPW6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.22■□□□□ 0.99
SATB2Q9UPW6 DUX4L4-201ENST00000566884 1269 ntBASIC21.22■□□□□ 0.99
SATB2Q9UPW6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SATB2Q9UPW6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.22■□□□□ 0.99
SATB2Q9UPW6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.21■□□□□ 0.99
SATB2Q9UPW6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SATB2Q9UPW6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms