Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL39Q9NYK5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL39Q9NYK5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
MRPL39Q9NYK5 AL356441.2-201ENST00000443009 864 ntBASIC19.91■□□□□ 0.78
MRPL39Q9NYK5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL39Q9NYK5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL39Q9NYK5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL39Q9NYK5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
MRPL39Q9NYK5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL39Q9NYK5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL39Q9NYK5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 SLC25A24-204ENST00000569674 2357 ntBASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 AC241377.3-202ENST00000626088 1088 ntBASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 AC241585.3-202ENST00000628937 1088 ntBASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 AC245100.8-202ENST00000629247 1058 ntBASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.9■□□□□ 0.78
MRPL39Q9NYK5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
MRPL39Q9NYK5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
MRPL39Q9NYK5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MRPL39Q9NYK5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.88■□□□□ 0.77
MRPL39Q9NYK5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPL39Q9NYK5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPL39Q9NYK5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPL39Q9NYK5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MRPL39Q9NYK5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPL39Q9NYK5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPL39Q9NYK5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPL39Q9NYK5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPL39Q9NYK5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MRPL39Q9NYK5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPL39Q9NYK5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MRPL39Q9NYK5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRPL39Q9NYK5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRPL39Q9NYK5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRPL39Q9NYK5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.87■□□□□ 0.77
MRPL39Q9NYK5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRPL39Q9NYK5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MRPL39Q9NYK5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MRPL39Q9NYK5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
MRPL39Q9NYK5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRPL39Q9NYK5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRPL39Q9NYK5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
MRPL39Q9NYK5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 AL499627.2-201ENST00000606283 725 ntBASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.86■□□□□ 0.77
MRPL39Q9NYK5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 AL121603.2-201ENST00000557373 2117 ntBASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 LINC00526-201ENST00000581067 1875 ntBASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms