Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.1■□□□□ 0.49
LIN7CQ9NUP9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LIN7CQ9NUP9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.1■□□□□ 0.49
LIN7CQ9NUP9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LIN7CQ9NUP9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.09■□□□□ 0.49
LIN7CQ9NUP9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.09■□□□□ 0.49
LIN7CQ9NUP9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LIN7CQ9NUP9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.09■□□□□ 0.49
LIN7CQ9NUP9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.09■□□□□ 0.49
LIN7CQ9NUP9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LIN7CQ9NUP9 AC087742.1-201ENST00000575880 1738 ntBASIC18.09■□□□□ 0.49
LIN7CQ9NUP9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LIN7CQ9NUP9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LIN7CQ9NUP9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LIN7CQ9NUP9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LIN7CQ9NUP9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LIN7CQ9NUP9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LIN7CQ9NUP9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.08■□□□□ 0.48
LIN7CQ9NUP9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LIN7CQ9NUP9 AL356740.2-201ENST00000601559 647 ntBASIC18.08■□□□□ 0.48
LIN7CQ9NUP9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LIN7CQ9NUP9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LIN7CQ9NUP9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 AC007375.3-201ENST00000600936 2314 ntBASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIN7CQ9NUP9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIN7CQ9NUP9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.06■□□□□ 0.48
LIN7CQ9NUP9 LINC01529-204ENST00000636474 1715 ntBASIC18.06■□□□□ 0.48
LIN7CQ9NUP9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LIN7CQ9NUP9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIN7CQ9NUP9 AL117332.1-201ENST00000622628 974 ntBASIC18.06■□□□□ 0.48
LIN7CQ9NUP9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.06■□□□□ 0.48
LIN7CQ9NUP9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.06■□□□□ 0.48
LIN7CQ9NUP9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 MIR3621-201ENST00000580529 85 ntBASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 AC131212.1-201ENST00000613771 668 ntBASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LIN7CQ9NUP9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 AC009086.3-201ENST00000623486 1008 ntBASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 FP325331.1-202ENST00000623531 1380 ntBASIC18.04■□□□□ 0.48
LIN7CQ9NUP9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 FBXW4P1-201ENST00000426721 2239 ntBASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LIN7CQ9NUP9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LIN7CQ9NUP9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms