Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX4Q9NQI0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.01■■□□□ 1.75
DDX4Q9NQI0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.01■■□□□ 1.75
DDX4Q9NQI0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.01■■□□□ 1.75
DDX4Q9NQI0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.01■■□□□ 1.75
DDX4Q9NQI0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
DDX4Q9NQI0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
DDX4Q9NQI0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX4Q9NQI0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX4Q9NQI0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
DDX4Q9NQI0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26■■□□□ 1.75
DDX4Q9NQI0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC26■■□□□ 1.75
DDX4Q9NQI0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
DDX4Q9NQI0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26■■□□□ 1.75
DDX4Q9NQI0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX4Q9NQI0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26■■□□□ 1.75
DDX4Q9NQI0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
DDX4Q9NQI0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX4Q9NQI0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX4Q9NQI0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.99■■□□□ 1.75
DDX4Q9NQI0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX4Q9NQI0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.99■■□□□ 1.75
DDX4Q9NQI0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
DDX4Q9NQI0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX4Q9NQI0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX4Q9NQI0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX4Q9NQI0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.98■■□□□ 1.75
DDX4Q9NQI0 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.98■■□□□ 1.75
DDX4Q9NQI0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.98■■□□□ 1.75
DDX4Q9NQI0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
DDX4Q9NQI0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX4Q9NQI0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX4Q9NQI0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
DDX4Q9NQI0 AC137761.2-201ENST00000561729 223 ntBASIC25.97■■□□□ 1.75
DDX4Q9NQI0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.97■■□□□ 1.75
DDX4Q9NQI0 AC145350.3-201ENST00000569033 163 ntBASIC25.97■■□□□ 1.75
DDX4Q9NQI0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX4Q9NQI0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX4Q9NQI0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX4Q9NQI0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX4Q9NQI0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.97■■□□□ 1.75
DDX4Q9NQI0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
DDX4Q9NQI0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.96■■□□□ 1.75
DDX4Q9NQI0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
DDX4Q9NQI0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.96■■□□□ 1.75
DDX4Q9NQI0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
DDX4Q9NQI0 RAP2CP1-201ENST00000605103 478 ntBASIC25.96■■□□□ 1.75
DDX4Q9NQI0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
DDX4Q9NQI0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
DDX4Q9NQI0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
DDX4Q9NQI0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
DDX4Q9NQI0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.95■■□□□ 1.74
DDX4Q9NQI0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX4Q9NQI0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX4Q9NQI0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DDX4Q9NQI0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DDX4Q9NQI0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX4Q9NQI0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
DDX4Q9NQI0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.94■■□□□ 1.74
DDX4Q9NQI0 AC080038.1-201ENST00000611274 1154 ntBASIC25.94■■□□□ 1.74
DDX4Q9NQI0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.94■■□□□ 1.74
DDX4Q9NQI0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX4Q9NQI0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX4Q9NQI0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
DDX4Q9NQI0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DDX4Q9NQI0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
DDX4Q9NQI0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.93■■□□□ 1.74
DDX4Q9NQI0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.93■■□□□ 1.74
DDX4Q9NQI0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.93■■□□□ 1.74
DDX4Q9NQI0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.93■■□□□ 1.74
DDX4Q9NQI0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
DDX4Q9NQI0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX4Q9NQI0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX4Q9NQI0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX4Q9NQI0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
DDX4Q9NQI0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
DDX4Q9NQI0 ID1-201ENST00000376105 1233 ntBASIC25.92■■□□□ 1.74
DDX4Q9NQI0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.92■■□□□ 1.74
DDX4Q9NQI0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
DDX4Q9NQI0 CDCA4P2-201ENST00000441182 718 ntBASIC25.92■■□□□ 1.74
DDX4Q9NQI0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX4Q9NQI0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX4Q9NQI0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.91■■□□□ 1.74
DDX4Q9NQI0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.91■■□□□ 1.74
DDX4Q9NQI0 AC016769.1-201ENST00000409132 1010 ntBASIC25.91■■□□□ 1.74
DDX4Q9NQI0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.91■■□□□ 1.74
DDX4Q9NQI0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.91■■□□□ 1.74
DDX4Q9NQI0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX4Q9NQI0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.91■■□□□ 1.74
DDX4Q9NQI0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX4Q9NQI0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX4Q9NQI0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
DDX4Q9NQI0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX4Q9NQI0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX4Q9NQI0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX4Q9NQI0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.9■■□□□ 1.74
DDX4Q9NQI0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX4Q9NQI0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC25.9■■□□□ 1.74
DDX4Q9NQI0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.9■■□□□ 1.74
DDX4Q9NQI0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms