Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SIX2Q9NPC8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.57■■□□□ 1.36
SIX2Q9NPC8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SIX2Q9NPC8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.57■■□□□ 1.36
SIX2Q9NPC8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SIX2Q9NPC8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.57■■□□□ 1.36
SIX2Q9NPC8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SIX2Q9NPC8 AC131281.2-201ENST00000520478 145 ntBASIC23.57■■□□□ 1.36
SIX2Q9NPC8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.57■■□□□ 1.36
SIX2Q9NPC8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
SIX2Q9NPC8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SIX2Q9NPC8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.57■■□□□ 1.36
SIX2Q9NPC8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.57■■□□□ 1.36
SIX2Q9NPC8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SIX2Q9NPC8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.56■■□□□ 1.36
SIX2Q9NPC8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SIX2Q9NPC8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.56■■□□□ 1.36
SIX2Q9NPC8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SIX2Q9NPC8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SIX2Q9NPC8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SIX2Q9NPC8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
SIX2Q9NPC8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SIX2Q9NPC8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.55■■□□□ 1.36
SIX2Q9NPC8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.55■■□□□ 1.36
SIX2Q9NPC8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
SIX2Q9NPC8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SIX2Q9NPC8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIX2Q9NPC8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIX2Q9NPC8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.54■■□□□ 1.36
SIX2Q9NPC8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIX2Q9NPC8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.54■■□□□ 1.36
SIX2Q9NPC8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SIX2Q9NPC8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIX2Q9NPC8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIX2Q9NPC8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIX2Q9NPC8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIX2Q9NPC8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.54■■□□□ 1.36
SIX2Q9NPC8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIX2Q9NPC8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIX2Q9NPC8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIX2Q9NPC8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.53■■□□□ 1.36
SIX2Q9NPC8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SIX2Q9NPC8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIX2Q9NPC8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SIX2Q9NPC8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SIX2Q9NPC8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.53■■□□□ 1.36
SIX2Q9NPC8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SIX2Q9NPC8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SIX2Q9NPC8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SIX2Q9NPC8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
SIX2Q9NPC8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.52■■□□□ 1.36
SIX2Q9NPC8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SIX2Q9NPC8 SERBP1P1-201ENST00000396021 1160 ntBASIC23.52■■□□□ 1.36
SIX2Q9NPC8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SIX2Q9NPC8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SIX2Q9NPC8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SIX2Q9NPC8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SIX2Q9NPC8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SIX2Q9NPC8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
SIX2Q9NPC8 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.51■■□□□ 1.35
SIX2Q9NPC8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SIX2Q9NPC8 OR2I1P-207ENST00000453522 948 ntBASIC23.51■■□□□ 1.35
SIX2Q9NPC8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.51■■□□□ 1.35
SIX2Q9NPC8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.51■■□□□ 1.35
SIX2Q9NPC8 AC010525.1-201ENST00000585559 441 ntBASIC23.51■■□□□ 1.35
SIX2Q9NPC8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
SIX2Q9NPC8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SIX2Q9NPC8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.51■■□□□ 1.35
SIX2Q9NPC8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SIX2Q9NPC8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.51■■□□□ 1.35
SIX2Q9NPC8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SIX2Q9NPC8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
SIX2Q9NPC8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
SIX2Q9NPC8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms