Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 AC142381.2-201ENST00000566120 298 ntBASIC23.1■■□□□ 1.29
LHX5Q9H2C1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
LHX5Q9H2C1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LHX5Q9H2C1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.09■■□□□ 1.29
LHX5Q9H2C1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LHX5Q9H2C1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
LHX5Q9H2C1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.09■■□□□ 1.29
LHX5Q9H2C1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LHX5Q9H2C1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LHX5Q9H2C1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LHX5Q9H2C1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LHX5Q9H2C1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LHX5Q9H2C1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
LHX5Q9H2C1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
LHX5Q9H2C1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
LHX5Q9H2C1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LHX5Q9H2C1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
LHX5Q9H2C1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.08■■□□□ 1.29
LHX5Q9H2C1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
LHX5Q9H2C1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
LHX5Q9H2C1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
LHX5Q9H2C1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.08■■□□□ 1.28
LHX5Q9H2C1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 LINC00526-201ENST00000581067 1875 ntBASIC23.07■■□□□ 1.28
LHX5Q9H2C1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 AC010141.3-201ENST00000456659 717 ntBASIC23.07■■□□□ 1.28
LHX5Q9H2C1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 AC233992.3-201ENST00000607491 485 ntBASIC23.07■■□□□ 1.28
LHX5Q9H2C1 AC087239.1-201ENST00000622671 572 ntBASIC23.07■■□□□ 1.28
LHX5Q9H2C1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LHX5Q9H2C1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LHX5Q9H2C1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LHX5Q9H2C1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LHX5Q9H2C1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.06■■□□□ 1.28
LHX5Q9H2C1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LHX5Q9H2C1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LHX5Q9H2C1 EDA-201ENST00000338901 1233 ntBASIC23.06■■□□□ 1.28
LHX5Q9H2C1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.06■■□□□ 1.28
LHX5Q9H2C1 AC079089.2-201ENST00000531211 1277 ntBASIC23.06■■□□□ 1.28
LHX5Q9H2C1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.06■■□□□ 1.28
LHX5Q9H2C1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.06■■□□□ 1.28
LHX5Q9H2C1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
LHX5Q9H2C1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LHX5Q9H2C1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.06■■□□□ 1.28
LHX5Q9H2C1 AC079834.2-201ENST00000609776 1949 ntBASIC23.06■■□□□ 1.28
LHX5Q9H2C1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.05■■□□□ 1.28
LHX5Q9H2C1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
LHX5Q9H2C1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LHX5Q9H2C1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.05■■□□□ 1.28
LHX5Q9H2C1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
LHX5Q9H2C1 AL031432.3-201ENST00000607698 485 ntBASIC23.05■■□□□ 1.28
LHX5Q9H2C1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.05■■□□□ 1.28
LHX5Q9H2C1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
LHX5Q9H2C1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.05■■□□□ 1.28
LHX5Q9H2C1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
LHX5Q9H2C1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LHX5Q9H2C1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
LHX5Q9H2C1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LHX5Q9H2C1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LHX5Q9H2C1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms