Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3Q9BZ76 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNTNAP3Q9BZ76 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.89■□□□□ 0.94
CNTNAP3Q9BZ76 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CNTNAP3Q9BZ76 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNTNAP3Q9BZ76 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CNTNAP3Q9BZ76 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CNTNAP3Q9BZ76 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP3Q9BZ76 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTNAP3Q9BZ76 AP004609.3-201ENST00000610705 1884 ntBASIC20.88■□□□□ 0.93
CNTNAP3Q9BZ76 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP3Q9BZ76 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP3Q9BZ76 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP3Q9BZ76 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CNTNAP3Q9BZ76 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP3Q9BZ76 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.88■□□□□ 0.93
CNTNAP3Q9BZ76 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.88■□□□□ 0.93
CNTNAP3Q9BZ76 AC073648.6-201ENST00000641589 218 ntBASIC20.88■□□□□ 0.93
CNTNAP3Q9BZ76 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 CNN2P6-201ENST00000439038 900 ntBASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 AC083880.1-201ENST00000608266 535 ntBASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3Q9BZ76 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP3Q9BZ76 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP3Q9BZ76 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.86■□□□□ 0.93
CNTNAP3Q9BZ76 SNORA78-201ENST00000459373 127 ntBASIC20.86■□□□□ 0.93
CNTNAP3Q9BZ76 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CNTNAP3Q9BZ76 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.86■□□□□ 0.93
CNTNAP3Q9BZ76 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 MKRN4P-201ENST00000444706 1521 ntBASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 ARMC10P1-201ENST00000313754 855 ntBASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 KRT18P35-201ENST00000510488 1269 ntBASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.85■□□□□ 0.93
CNTNAP3Q9BZ76 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP3Q9BZ76 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP3Q9BZ76 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP3Q9BZ76 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CNTNAP3Q9BZ76 AL359736.2-201ENST00000621992 437 ntBASIC20.84■□□□□ 0.93
CNTNAP3Q9BZ76 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.84■□□□□ 0.93
CNTNAP3Q9BZ76 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.84■□□□□ 0.93
CNTNAP3Q9BZ76 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP3Q9BZ76 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP3Q9BZ76 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP3Q9BZ76 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP3Q9BZ76 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP3Q9BZ76 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.83■□□□□ 0.93
CNTNAP3Q9BZ76 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTNAP3Q9BZ76 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CNTNAP3Q9BZ76 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CNTNAP3Q9BZ76 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP3Q9BZ76 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CNTNAP3Q9BZ76 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms