Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXC2Q99958 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXC2Q99958 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXC2Q99958 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXC2Q99958 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXC2Q99958 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
FOXC2Q99958 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXC2Q99958 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
FOXC2Q99958 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXC2Q99958 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
FOXC2Q99958 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.46■□□□□ 0.55
FOXC2Q99958 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
FOXC2Q99958 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FOXC2Q99958 AC133552.2-202ENST00000575694 574 ntBASIC18.46■□□□□ 0.55
FOXC2Q99958 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
FOXC2Q99958 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXC2Q99958 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXC2Q99958 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXC2Q99958 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
FOXC2Q99958 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
FOXC2Q99958 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXC2Q99958 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
FOXC2Q99958 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXC2Q99958 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXC2Q99958 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXC2Q99958 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.45■□□□□ 0.54
FOXC2Q99958 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXC2Q99958 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXC2Q99958 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXC2Q99958 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXC2Q99958 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXC2Q99958 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
FOXC2Q99958 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.45■□□□□ 0.54
FOXC2Q99958 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXC2Q99958 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXC2Q99958 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXC2Q99958 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXC2Q99958 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXC2Q99958 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXC2Q99958 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
FOXC2Q99958 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXC2Q99958 AC010141.3-201ENST00000456659 717 ntBASIC18.44■□□□□ 0.54
FOXC2Q99958 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXC2Q99958 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXC2Q99958 AC104187.1-201ENST00000607510 612 ntBASIC18.44■□□□□ 0.54
FOXC2Q99958 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXC2Q99958 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXC2Q99958 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXC2Q99958 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXC2Q99958 KRT87P-202ENST00000534226 1464 ntBASIC18.44■□□□□ 0.54
FOXC2Q99958 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXC2Q99958 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXC2Q99958 PRORSD1P-201ENST00000295112 541 ntBASIC18.43■□□□□ 0.54
FOXC2Q99958 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
FOXC2Q99958 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
FOXC2Q99958 AC105036.2-201ENST00000569468 176 ntBASIC18.43■□□□□ 0.54
FOXC2Q99958 MIR4758-201ENST00000577688 71 ntBASIC18.43■□□□□ 0.54
FOXC2Q99958 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXC2Q99958 UBE2DNL-204ENST00000602536 740 ntBASIC18.43■□□□□ 0.54
FOXC2Q99958 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXC2Q99958 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXC2Q99958 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXC2Q99958 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXC2Q99958 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXC2Q99958 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXC2Q99958 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXC2Q99958 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXC2Q99958 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXC2Q99958 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXC2Q99958 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXC2Q99958 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXC2Q99958 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXC2Q99958 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXC2Q99958 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXC2Q99958 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
FOXC2Q99958 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXC2Q99958 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXC2Q99958 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXC2Q99958 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXC2Q99958 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXC2Q99958 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXC2Q99958 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXC2Q99958 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
FOXC2Q99958 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXC2Q99958 MYCNOS-205ENST00000641950 531 ntBASIC18.41■□□□□ 0.54
FOXC2Q99958 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXC2Q99958 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXC2Q99958 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXC2Q99958 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXC2Q99958 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXC2Q99958 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXC2Q99958 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
FOXC2Q99958 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXC2Q99958 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
FOXC2Q99958 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXC2Q99958 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXC2Q99958 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXC2Q99958 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXC2Q99958 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXC2Q99958 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms