Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 AC129492.7-201ENST00000622992 756 ntBASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP6Q96FZ7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 KRT18P60-201ENST00000312876 1297 ntBASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP6Q96FZ7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CHMP6Q96FZ7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
CHMP6Q96FZ7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
CHMP6Q96FZ7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHMP6Q96FZ7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHMP6Q96FZ7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHMP6Q96FZ7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP6Q96FZ7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP6Q96FZ7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CHMP6Q96FZ7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.89■■□□□ 1.09
CHMP6Q96FZ7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP6Q96FZ7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP6Q96FZ7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.89■■□□□ 1.09
CHMP6Q96FZ7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP6Q96FZ7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 NTF6A-201ENST00000591175 560 ntBASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
CHMP6Q96FZ7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 DUX4L18-201ENST00000553347 1267 ntBASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP6Q96FZ7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CHMP6Q96FZ7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP6Q96FZ7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CHMP6Q96FZ7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.86■■□□□ 1.09
CHMP6Q96FZ7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.86■■□□□ 1.09
CHMP6Q96FZ7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP6Q96FZ7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.86■■□□□ 1.09
CHMP6Q96FZ7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.86■■□□□ 1.09
CHMP6Q96FZ7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP6Q96FZ7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
CHMP6Q96FZ7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.85■■□□□ 1.09
CHMP6Q96FZ7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP6Q96FZ7 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.85■■□□□ 1.09
CHMP6Q96FZ7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP6Q96FZ7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CHMP6Q96FZ7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
CHMP6Q96FZ7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms