Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF31Q96EP0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RNF31Q96EP0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF31Q96EP0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
RNF31Q96EP0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RNF31Q96EP0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF31Q96EP0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF31Q96EP0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RNF31Q96EP0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF31Q96EP0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF31Q96EP0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF31Q96EP0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF31Q96EP0 AC004911.1-201ENST00000416316 871 ntBASIC20.97■□□□□ 0.95
RNF31Q96EP0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF31Q96EP0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF31Q96EP0 AL358852.1-201ENST00000623174 1268 ntBASIC20.97■□□□□ 0.95
RNF31Q96EP0 AC092437.1-201ENST00000624794 1048 ntBASIC20.97■□□□□ 0.95
RNF31Q96EP0 AC105233.4-201ENST00000642045 216 ntBASIC20.97■□□□□ 0.95
RNF31Q96EP0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF31Q96EP0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF31Q96EP0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF31Q96EP0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF31Q96EP0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF31Q96EP0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF31Q96EP0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF31Q96EP0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF31Q96EP0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF31Q96EP0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF31Q96EP0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF31Q96EP0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RNF31Q96EP0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RNF31Q96EP0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.96■□□□□ 0.95
RNF31Q96EP0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF31Q96EP0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF31Q96EP0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF31Q96EP0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF31Q96EP0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.96■□□□□ 0.95
RNF31Q96EP0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF31Q96EP0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF31Q96EP0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF31Q96EP0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RNF31Q96EP0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF31Q96EP0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF31Q96EP0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RNF31Q96EP0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNF31Q96EP0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF31Q96EP0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF31Q96EP0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF31Q96EP0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF31Q96EP0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF31Q96EP0 AC027612.3-201ENST00000413684 1047 ntBASIC20.95■□□□□ 0.94
RNF31Q96EP0 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.95■□□□□ 0.94
RNF31Q96EP0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.95■□□□□ 0.94
RNF31Q96EP0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF31Q96EP0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF31Q96EP0 AC090192.1-201ENST00000517740 490 ntBASIC20.95■□□□□ 0.94
RNF31Q96EP0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.95■□□□□ 0.94
RNF31Q96EP0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF31Q96EP0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RNF31Q96EP0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF31Q96EP0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF31Q96EP0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF31Q96EP0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF31Q96EP0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF31Q96EP0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF31Q96EP0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF31Q96EP0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF31Q96EP0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF31Q96EP0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF31Q96EP0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF31Q96EP0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF31Q96EP0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
RNF31Q96EP0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF31Q96EP0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.94■□□□□ 0.94
RNF31Q96EP0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF31Q96EP0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF31Q96EP0 KRT18P14-201ENST00000534205 1250 ntBASIC20.94■□□□□ 0.94
RNF31Q96EP0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF31Q96EP0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF31Q96EP0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF31Q96EP0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RNF31Q96EP0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF31Q96EP0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF31Q96EP0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF31Q96EP0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF31Q96EP0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF31Q96EP0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF31Q96EP0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF31Q96EP0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF31Q96EP0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RNF31Q96EP0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF31Q96EP0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF31Q96EP0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF31Q96EP0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF31Q96EP0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF31Q96EP0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF31Q96EP0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF31Q96EP0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF31Q96EP0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF31Q96EP0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms