Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.66■■□□□ 1.22
TTC28Q96AY4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TTC28Q96AY4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.66■■□□□ 1.22
TTC28Q96AY4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC28Q96AY4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TTC28Q96AY4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TTC28Q96AY4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TTC28Q96AY4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
TTC28Q96AY4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TTC28Q96AY4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TTC28Q96AY4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
TTC28Q96AY4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC28Q96AY4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TTC28Q96AY4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC28Q96AY4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.65■■□□□ 1.22
TTC28Q96AY4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC28Q96AY4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.65■■□□□ 1.22
TTC28Q96AY4 AP003097.1-201ENST00000530657 1135 ntBASIC22.65■■□□□ 1.22
TTC28Q96AY4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
TTC28Q96AY4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TTC28Q96AY4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC28Q96AY4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC28Q96AY4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.65■■□□□ 1.22
TTC28Q96AY4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TTC28Q96AY4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.65■■□□□ 1.22
TTC28Q96AY4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.65■■□□□ 1.22
TTC28Q96AY4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.65■■□□□ 1.22
TTC28Q96AY4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.65■■□□□ 1.22
TTC28Q96AY4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
TTC28Q96AY4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TTC28Q96AY4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.64■■□□□ 1.21
TTC28Q96AY4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TTC28Q96AY4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.64■■□□□ 1.21
TTC28Q96AY4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
TTC28Q96AY4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
TTC28Q96AY4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.64■■□□□ 1.21
TTC28Q96AY4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.64■■□□□ 1.21
TTC28Q96AY4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TTC28Q96AY4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC28Q96AY4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TTC28Q96AY4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.63■■□□□ 1.21
TTC28Q96AY4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
TTC28Q96AY4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC28Q96AY4 ERN1-208ENST00000606895 2068 ntBASIC22.63■■□□□ 1.21
TTC28Q96AY4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC28Q96AY4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC28Q96AY4 ARMC10P1-201ENST00000313754 855 ntBASIC22.63■■□□□ 1.21
TTC28Q96AY4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC28Q96AY4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.63■■□□□ 1.21
TTC28Q96AY4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TTC28Q96AY4 KRT18P35-201ENST00000510488 1269 ntBASIC22.63■■□□□ 1.21
TTC28Q96AY4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TTC28Q96AY4 AP001160.3-201ENST00000601484 763 ntBASIC22.63■■□□□ 1.21
TTC28Q96AY4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TTC28Q96AY4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.62■■□□□ 1.21
TTC28Q96AY4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TTC28Q96AY4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.62■■□□□ 1.21
TTC28Q96AY4 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.62■■□□□ 1.21
TTC28Q96AY4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.62■■□□□ 1.21
TTC28Q96AY4 AC091874.3-201ENST00000512672 1195 ntBASIC22.62■■□□□ 1.21
TTC28Q96AY4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TTC28Q96AY4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC28Q96AY4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC28Q96AY4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.62■■□□□ 1.21
TTC28Q96AY4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC28Q96AY4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.62■■□□□ 1.21
TTC28Q96AY4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TTC28Q96AY4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.61■■□□□ 1.21
TTC28Q96AY4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC28Q96AY4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.61■■□□□ 1.21
TTC28Q96AY4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC28Q96AY4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
TTC28Q96AY4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.6■■□□□ 1.21
TTC28Q96AY4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TTC28Q96AY4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.6■■□□□ 1.21
TTC28Q96AY4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.6■■□□□ 1.21
TTC28Q96AY4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC28Q96AY4 AC012618.2-201ENST00000428058 849 ntBASIC22.6■■□□□ 1.21
TTC28Q96AY4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.6■■□□□ 1.21
TTC28Q96AY4 RN7SL850P-201ENST00000579959 291 ntBASIC22.6■■□□□ 1.21
TTC28Q96AY4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.6■■□□□ 1.21
TTC28Q96AY4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.6■■□□□ 1.21
TTC28Q96AY4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC28Q96AY4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC28Q96AY4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TTC28Q96AY4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
TTC28Q96AY4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC28Q96AY4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
TTC28Q96AY4 AC068338.2-201ENST00000563278 1430 ntBASIC22.59■■□□□ 1.21
TTC28Q96AY4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
TTC28Q96AY4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TTC28Q96AY4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC28Q96AY4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC28Q96AY4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TTC28Q96AY4 FP325331.1-202ENST00000623531 1380 ntBASIC22.59■■□□□ 1.21
TTC28Q96AY4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC28Q96AY4 C2orf69P4-201ENST00000565394 541 ntBASIC22.59■■□□□ 1.21
TTC28Q96AY4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.59■■□□□ 1.21
TTC28Q96AY4 BX276092.2-201ENST00000417668 665 ntBASIC22.58■■□□□ 1.21
TTC28Q96AY4 CYP2T1P-201ENST00000432607 1285 ntBASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms