Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFT1Q96AA3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.23■□□□□ 0.67
RFT1Q96AA3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RFT1Q96AA3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RFT1Q96AA3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFT1Q96AA3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.23■□□□□ 0.67
RFT1Q96AA3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFT1Q96AA3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFT1Q96AA3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFT1Q96AA3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFT1Q96AA3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFT1Q96AA3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.23■□□□□ 0.67
RFT1Q96AA3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RFT1Q96AA3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFT1Q96AA3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RFT1Q96AA3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.23■□□□□ 0.67
RFT1Q96AA3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFT1Q96AA3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.22■□□□□ 0.67
RFT1Q96AA3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.22■□□□□ 0.67
RFT1Q96AA3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RFT1Q96AA3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFT1Q96AA3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFT1Q96AA3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.22■□□□□ 0.67
RFT1Q96AA3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFT1Q96AA3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.22■□□□□ 0.67
RFT1Q96AA3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.22■□□□□ 0.67
RFT1Q96AA3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFT1Q96AA3 AC080038.3-201ENST00000623346 1952 ntBASIC19.22■□□□□ 0.67
RFT1Q96AA3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RFT1Q96AA3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFT1Q96AA3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFT1Q96AA3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RFT1Q96AA3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFT1Q96AA3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.21■□□□□ 0.67
RFT1Q96AA3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFT1Q96AA3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RFT1Q96AA3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RFT1Q96AA3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RFT1Q96AA3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFT1Q96AA3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFT1Q96AA3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RFT1Q96AA3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFT1Q96AA3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RFT1Q96AA3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RFT1Q96AA3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFT1Q96AA3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFT1Q96AA3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFT1Q96AA3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RFT1Q96AA3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFT1Q96AA3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RFT1Q96AA3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFT1Q96AA3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RFT1Q96AA3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFT1Q96AA3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.2■□□□□ 0.66
RFT1Q96AA3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
RFT1Q96AA3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFT1Q96AA3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.2■□□□□ 0.66
RFT1Q96AA3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFT1Q96AA3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFT1Q96AA3 AL353803.4-201ENST00000565882 1934 ntBASIC19.19■□□□□ 0.66
RFT1Q96AA3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFT1Q96AA3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFT1Q96AA3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFT1Q96AA3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
RFT1Q96AA3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RFT1Q96AA3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFT1Q96AA3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFT1Q96AA3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.19■□□□□ 0.66
RFT1Q96AA3 SNX5-217ENST00000606557 1087 ntBASIC19.19■□□□□ 0.66
RFT1Q96AA3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.19■□□□□ 0.66
RFT1Q96AA3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.19■□□□□ 0.66
RFT1Q96AA3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFT1Q96AA3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.19■□□□□ 0.66
RFT1Q96AA3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.19■□□□□ 0.66
RFT1Q96AA3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFT1Q96AA3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.19■□□□□ 0.66
RFT1Q96AA3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RFT1Q96AA3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFT1Q96AA3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFT1Q96AA3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.18■□□□□ 0.66
RFT1Q96AA3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RFT1Q96AA3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.18■□□□□ 0.66
RFT1Q96AA3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.18■□□□□ 0.66
RFT1Q96AA3 FAM99A-202ENST00000538190 1989 ntBASIC19.18■□□□□ 0.66
RFT1Q96AA3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RFT1Q96AA3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFT1Q96AA3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.18■□□□□ 0.66
RFT1Q96AA3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
RFT1Q96AA3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RFT1Q96AA3 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.18■□□□□ 0.66
RFT1Q96AA3 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.18■□□□□ 0.66
RFT1Q96AA3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFT1Q96AA3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFT1Q96AA3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFT1Q96AA3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFT1Q96AA3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFT1Q96AA3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFT1Q96AA3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFT1Q96AA3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.17■□□□□ 0.66
RFT1Q96AA3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms