Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.6■□□□□ 0.73
PTP4A1Q93096 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PTP4A1Q93096 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTP4A1Q93096 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PTP4A1Q93096 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.6■□□□□ 0.73
PTP4A1Q93096 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A1Q93096 TSPY9P-201ENST00000440215 945 ntBASIC19.59■□□□□ 0.73
PTP4A1Q93096 TSPY11P-201ENST00000442607 1045 ntBASIC19.59■□□□□ 0.73
PTP4A1Q93096 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.59■□□□□ 0.73
PTP4A1Q93096 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A1Q93096 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.59■□□□□ 0.73
PTP4A1Q93096 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A1Q93096 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A1Q93096 FAM99A-202ENST00000538190 1989 ntBASIC19.59■□□□□ 0.73
PTP4A1Q93096 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A1Q93096 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTP4A1Q93096 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.58■□□□□ 0.73
PTP4A1Q93096 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTP4A1Q93096 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
PTP4A1Q93096 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.58■□□□□ 0.73
PTP4A1Q93096 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTP4A1Q93096 CA15P2-201ENST00000611168 834 ntBASIC19.58■□□□□ 0.72
PTP4A1Q93096 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.58■□□□□ 0.72
PTP4A1Q93096 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTP4A1Q93096 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTP4A1Q93096 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTP4A1Q93096 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PTP4A1Q93096 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTP4A1Q93096 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTP4A1Q93096 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTP4A1Q93096 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTP4A1Q93096 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A1Q93096 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
PTP4A1Q93096 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.57■□□□□ 0.72
PTP4A1Q93096 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A1Q93096 GUSBP5-201ENST00000418136 578 ntBASIC19.57■□□□□ 0.72
PTP4A1Q93096 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A1Q93096 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.57■□□□□ 0.72
PTP4A1Q93096 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.57■□□□□ 0.72
PTP4A1Q93096 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A1Q93096 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A1Q93096 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.56■□□□□ 0.72
PTP4A1Q93096 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTP4A1Q93096 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.56■□□□□ 0.72
PTP4A1Q93096 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.56■□□□□ 0.72
PTP4A1Q93096 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTP4A1Q93096 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTP4A1Q93096 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PTP4A1Q93096 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTP4A1Q93096 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.56■□□□□ 0.72
PTP4A1Q93096 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PTP4A1Q93096 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.55■□□□□ 0.72
PTP4A1Q93096 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTP4A1Q93096 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTP4A1Q93096 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.55■□□□□ 0.72
PTP4A1Q93096 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.55■□□□□ 0.72
PTP4A1Q93096 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.55■□□□□ 0.72
PTP4A1Q93096 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTP4A1Q93096 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTP4A1Q93096 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTP4A1Q93096 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTP4A1Q93096 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTP4A1Q93096 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
PTP4A1Q93096 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.55■□□□□ 0.72
PTP4A1Q93096 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.55■□□□□ 0.72
PTP4A1Q93096 UNC93B8-201ENST00000511903 705 ntBASIC19.55■□□□□ 0.72
PTP4A1Q93096 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTP4A1Q93096 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTP4A1Q93096 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PTP4A1Q93096 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PTP4A1Q93096 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTP4A1Q93096 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PTP4A1Q93096 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.54■□□□□ 0.72
PTP4A1Q93096 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTP4A1Q93096 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
PTP4A1Q93096 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTP4A1Q93096 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTP4A1Q93096 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTP4A1Q93096 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PTP4A1Q93096 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTP4A1Q93096 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTP4A1Q93096 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PTP4A1Q93096 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PTP4A1Q93096 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTP4A1Q93096 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTP4A1Q93096 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTP4A1Q93096 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.53■□□□□ 0.72
PTP4A1Q93096 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTP4A1Q93096 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTP4A1Q93096 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PTP4A1Q93096 C17orf82-201ENST00000623772 1530 ntBASIC19.53■□□□□ 0.72
PTP4A1Q93096 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTP4A1Q93096 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTP4A1Q93096 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.53■□□□□ 0.72
PTP4A1Q93096 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PTP4A1Q93096 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.53■□□□□ 0.72
PTP4A1Q93096 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTP4A1Q93096 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.53■□□□□ 0.72
PTP4A1Q93096 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTP4A1Q93096 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms