Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB3Q92617 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB3Q92617 MTDHP2-201ENST00000601468 714 ntBASIC17.18■□□□□ 0.34
NPIPB3Q92617 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB3Q92617 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB3Q92617 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB3Q92617 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NPIPB3Q92617 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB3Q92617 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB3Q92617 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB3Q92617 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NPIPB3Q92617 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB3Q92617 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPB3Q92617 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPB3Q92617 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPB3Q92617 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPB3Q92617 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPB3Q92617 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPB3Q92617 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPB3Q92617 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPB3Q92617 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPB3Q92617 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPB3Q92617 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPB3Q92617 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPB3Q92617 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPB3Q92617 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPB3Q92617 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPB3Q92617 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPB3Q92617 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPB3Q92617 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NPIPB3Q92617 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPB3Q92617 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPB3Q92617 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPB3Q92617 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPB3Q92617 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NPIPB3Q92617 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPB3Q92617 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NPIPB3Q92617 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPB3Q92617 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPB3Q92617 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPB3Q92617 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPB3Q92617 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPB3Q92617 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.15■□□□□ 0.34
NPIPB3Q92617 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPB3Q92617 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NPIPB3Q92617 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPB3Q92617 Z92544.1-202ENST00000571933 1220 ntBASIC17.15■□□□□ 0.34
NPIPB3Q92617 MIR4787-201ENST00000607364 84 ntBASIC17.15■□□□□ 0.34
NPIPB3Q92617 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.15■□□□□ 0.34
NPIPB3Q92617 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPB3Q92617 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPB3Q92617 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
NPIPB3Q92617 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.14■□□□□ 0.34
NPIPB3Q92617 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB3Q92617 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB3Q92617 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NPIPB3Q92617 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB3Q92617 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.14■□□□□ 0.33
NPIPB3Q92617 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NPIPB3Q92617 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB3Q92617 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.14■□□□□ 0.33
NPIPB3Q92617 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB3Q92617 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NPIPB3Q92617 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.14■□□□□ 0.33
NPIPB3Q92617 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB3Q92617 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NPIPB3Q92617 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.13■□□□□ 0.33
NPIPB3Q92617 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.13■□□□□ 0.33
NPIPB3Q92617 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.13■□□□□ 0.33
NPIPB3Q92617 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NPIPB3Q92617 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.13■□□□□ 0.33
NPIPB3Q92617 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB3Q92617 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.12■□□□□ 0.33
NPIPB3Q92617 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms