Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC34.35■■■■□ 3.09
CASKIN1Q8WXD9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC34.34■■■■□ 3.09
CASKIN1Q8WXD9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC34.34■■■■□ 3.09
CASKIN1Q8WXD9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
CASKIN1Q8WXD9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC34.34■■■■□ 3.09
CASKIN1Q8WXD9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CASKIN1Q8WXD9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC34.34■■■■□ 3.09
CASKIN1Q8WXD9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
CASKIN1Q8WXD9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
CASKIN1Q8WXD9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC34.33■■■■□ 3.09
CASKIN1Q8WXD9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC34.33■■■■□ 3.09
CASKIN1Q8WXD9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC34.33■■■■□ 3.09
CASKIN1Q8WXD9 AC073111.5-205ENST00000641717 521 ntBASIC34.33■■■■□ 3.09
CASKIN1Q8WXD9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC34.33■■■■□ 3.09
CASKIN1Q8WXD9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
CASKIN1Q8WXD9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
CASKIN1Q8WXD9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CASKIN1Q8WXD9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CASKIN1Q8WXD9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC34.32■■■■□ 3.08
CASKIN1Q8WXD9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC34.32■■■■□ 3.08
CASKIN1Q8WXD9 GAS2L1P2-201ENST00000436355 1356 ntBASIC34.31■■■■□ 3.08
CASKIN1Q8WXD9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC34.31■■■■□ 3.08
CASKIN1Q8WXD9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
CASKIN1Q8WXD9 ID1-201ENST00000376105 1233 ntBASIC34.31■■■■□ 3.08
CASKIN1Q8WXD9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC34.31■■■■□ 3.08
CASKIN1Q8WXD9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC34.31■■■■□ 3.08
CASKIN1Q8WXD9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CASKIN1Q8WXD9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC34.31■■■■□ 3.08
CASKIN1Q8WXD9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
CASKIN1Q8WXD9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC34.31■■■■□ 3.08
CASKIN1Q8WXD9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
CASKIN1Q8WXD9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC34.3■■■■□ 3.08
CASKIN1Q8WXD9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
CASKIN1Q8WXD9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC34.3■■■■□ 3.08
CASKIN1Q8WXD9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC34.3■■■■□ 3.08
CASKIN1Q8WXD9 AC005224.4-201ENST00000583262 1652 ntBASIC34.3■■■■□ 3.08
CASKIN1Q8WXD9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CASKIN1Q8WXD9 AC080038.1-201ENST00000611274 1154 ntBASIC34.3■■■■□ 3.08
CASKIN1Q8WXD9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CASKIN1Q8WXD9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC34.29■■■■□ 3.08
CASKIN1Q8WXD9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC34.29■■■■□ 3.08
CASKIN1Q8WXD9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC34.29■■■■□ 3.08
CASKIN1Q8WXD9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CASKIN1Q8WXD9 CDCA4P2-201ENST00000441182 718 ntBASIC34.29■■■■□ 3.08
CASKIN1Q8WXD9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC34.29■■■■□ 3.08
CASKIN1Q8WXD9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC34.29■■■■□ 3.08
CASKIN1Q8WXD9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CASKIN1Q8WXD9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC34.28■■■■□ 3.08
CASKIN1Q8WXD9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC34.28■■■■□ 3.08
CASKIN1Q8WXD9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC34.28■■■■□ 3.08
CASKIN1Q8WXD9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
CASKIN1Q8WXD9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
CASKIN1Q8WXD9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC34.27■■■■□ 3.08
CASKIN1Q8WXD9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CASKIN1Q8WXD9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC34.27■■■■□ 3.08
CASKIN1Q8WXD9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CASKIN1Q8WXD9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
CASKIN1Q8WXD9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC34.27■■■■□ 3.08
CASKIN1Q8WXD9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC34.27■■■■□ 3.08
CASKIN1Q8WXD9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC34.26■■■■□ 3.08
CASKIN1Q8WXD9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.07
CASKIN1Q8WXD9 AC016769.1-201ENST00000409132 1010 ntBASIC34.26■■■■□ 3.07
CASKIN1Q8WXD9 AC079140.4-201ENST00000507448 529 ntBASIC34.26■■■■□ 3.07
CASKIN1Q8WXD9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC34.26■■■■□ 3.07
CASKIN1Q8WXD9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC34.26■■■■□ 3.07
CASKIN1Q8WXD9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC34.26■■■■□ 3.07
CASKIN1Q8WXD9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
CASKIN1Q8WXD9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CASKIN1Q8WXD9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC34.25■■■■□ 3.07
CASKIN1Q8WXD9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
CASKIN1Q8WXD9 KRT19P1-201ENST00000405746 1186 ntBASIC34.25■■■■□ 3.07
CASKIN1Q8WXD9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
CASKIN1Q8WXD9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC34.25■■■■□ 3.07
CASKIN1Q8WXD9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC34.25■■■■□ 3.07
CASKIN1Q8WXD9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CASKIN1Q8WXD9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CASKIN1Q8WXD9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CASKIN1Q8WXD9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
CASKIN1Q8WXD9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC34.24■■■■□ 3.07
CASKIN1Q8WXD9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CASKIN1Q8WXD9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC34.23■■■■□ 3.07
CASKIN1Q8WXD9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC34.23■■■■□ 3.07
CASKIN1Q8WXD9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC34.23■■■■□ 3.07
CASKIN1Q8WXD9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC34.23■■■■□ 3.07
CASKIN1Q8WXD9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC34.23■■■■□ 3.07
CASKIN1Q8WXD9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
CASKIN1Q8WXD9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
CASKIN1Q8WXD9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC34.23■■■■□ 3.07
CASKIN1Q8WXD9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
CASKIN1Q8WXD9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
CASKIN1Q8WXD9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC34.22■■■■□ 3.07
CASKIN1Q8WXD9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC34.21■■■■□ 3.07
CASKIN1Q8WXD9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC34.21■■■■□ 3.07
CASKIN1Q8WXD9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC34.21■■■■□ 3.07
CASKIN1Q8WXD9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
CASKIN1Q8WXD9 KRT87P-202ENST00000534226 1464 ntBASIC34.21■■■■□ 3.07
CASKIN1Q8WXD9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC34.21■■■■□ 3.07
CASKIN1Q8WXD9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC34.21■■■■□ 3.07
CASKIN1Q8WXD9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
CASKIN1Q8WXD9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC34.2■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms