Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLL1Q8TB92 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLL1Q8TB92 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.48■■□□□ 1.03
HMGCLL1Q8TB92 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLL1Q8TB92 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLL1Q8TB92 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLL1Q8TB92 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.48■■□□□ 1.03
HMGCLL1Q8TB92 AC110285.6-201ENST00000617652 491 ntBASIC21.48■■□□□ 1.03
HMGCLL1Q8TB92 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.48■■□□□ 1.03
HMGCLL1Q8TB92 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.48■■□□□ 1.03
HMGCLL1Q8TB92 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 AC136469.2-201ENST00000623944 1028 ntBASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 AC080038.3-201ENST00000623346 1952 ntBASIC21.47■■□□□ 1.03
HMGCLL1Q8TB92 AC133637.1-201ENST00000624115 1537 ntBASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 AL139246.5-201ENST00000606645 996 ntBASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 AL136162.1-201ENST00000607711 1078 ntBASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLL1Q8TB92 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 AL137060.1-201ENST00000618151 2648 ntBASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 AC106739.1-201ENST00000617035 715 ntBASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 AC135279.3-201ENST00000610945 1311 ntBASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGCLL1Q8TB92 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 AC024257.2-201ENST00000549699 147 ntBASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 AC133561.4-201ENST00000566112 224 ntBASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLL1Q8TB92 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
HMGCLL1Q8TB92 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HMGCLL1Q8TB92 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGCLL1Q8TB92 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.43■■□□□ 1.02
HMGCLL1Q8TB92 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
HMGCLL1Q8TB92 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
HMGCLL1Q8TB92 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HMGCLL1Q8TB92 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGCLL1Q8TB92 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.43■■□□□ 1.02
HMGCLL1Q8TB92 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.43■■□□□ 1.02
HMGCLL1Q8TB92 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HMGCLL1Q8TB92 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
HMGCLL1Q8TB92 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGCLL1Q8TB92 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGCLL1Q8TB92 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HMGCLL1Q8TB92 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.42■■□□□ 1.02
HMGCLL1Q8TB92 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGCLL1Q8TB92 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms