Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.62■■□□□ 1.69
SMARCC2Q8TAQ2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 AC142381.2-201ENST00000566120 298 ntBASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 AL031432.3-201ENST00000607698 485 ntBASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 AL355001.2-201ENST00000620617 1191 ntBASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMARCC2Q8TAQ2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
SMARCC2Q8TAQ2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC2Q8TAQ2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC2Q8TAQ2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC2Q8TAQ2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.6■■□□□ 1.69
SMARCC2Q8TAQ2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.6■■□□□ 1.69
SMARCC2Q8TAQ2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC2Q8TAQ2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC2Q8TAQ2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC2Q8TAQ2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC2Q8TAQ2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC2Q8TAQ2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC2Q8TAQ2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
SMARCC2Q8TAQ2 AC092053.2-201ENST00000640557 1818 ntBASIC25.59■■□□□ 1.69
SMARCC2Q8TAQ2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.59■■□□□ 1.69
SMARCC2Q8TAQ2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC2Q8TAQ2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.59■■□□□ 1.69
SMARCC2Q8TAQ2 AC136469.2-201ENST00000623944 1028 ntBASIC25.59■■□□□ 1.69
SMARCC2Q8TAQ2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
SMARCC2Q8TAQ2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC2Q8TAQ2 AC137767.1-201ENST00000602918 1920 ntBASIC25.59■■□□□ 1.69
SMARCC2Q8TAQ2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SMARCC2Q8TAQ2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SMARCC2Q8TAQ2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.58■■□□□ 1.69
SMARCC2Q8TAQ2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
SMARCC2Q8TAQ2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
SMARCC2Q8TAQ2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SMARCC2Q8TAQ2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.58■■□□□ 1.69
SMARCC2Q8TAQ2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SMARCC2Q8TAQ2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SMARCC2Q8TAQ2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SMARCC2Q8TAQ2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SMARCC2Q8TAQ2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.58■■□□□ 1.69
SMARCC2Q8TAQ2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.68
SMARCC2Q8TAQ2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 SUDS3P1-201ENST00000505831 966 ntBASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 CA15P2-201ENST00000611168 834 ntBASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.57■■□□□ 1.68
SMARCC2Q8TAQ2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.56■■□□□ 1.68
SMARCC2Q8TAQ2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCC2Q8TAQ2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.56■■□□□ 1.68
SMARCC2Q8TAQ2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
SMARCC2Q8TAQ2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCC2Q8TAQ2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCC2Q8TAQ2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.55■■□□□ 1.68
SMARCC2Q8TAQ2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCC2Q8TAQ2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.55■■□□□ 1.68
SMARCC2Q8TAQ2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
SMARCC2Q8TAQ2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCC2Q8TAQ2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.55■■□□□ 1.68
SMARCC2Q8TAQ2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCC2Q8TAQ2 AF213884.3-201ENST00000563833 479 ntBASIC25.55■■□□□ 1.68
SMARCC2Q8TAQ2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.55■■□□□ 1.68
SMARCC2Q8TAQ2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms