Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.19
SVIPQ8NHG7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SVIPQ8NHG7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SVIPQ8NHG7 SMG8-203ENST00000578922 2178 ntBASIC13.83□□□□□ -0.19
SVIPQ8NHG7 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.83□□□□□ -0.19
SVIPQ8NHG7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
SVIPQ8NHG7 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SVIPQ8NHG7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC13.83□□□□□ -0.2
SVIPQ8NHG7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 AC012313.1-201ENST00000593393 3059 ntBASIC13.82□□□□□ -0.2
SVIPQ8NHG7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 POM121L4P-202ENST00000427789 1891 ntBASIC13.82□□□□□ -0.2
SVIPQ8NHG7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SVIPQ8NHG7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SVIPQ8NHG7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms