Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 DYNLL1-208ENST00000550178 581 ntBASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.03□□□□□ -0.48
SPTSSBQ8NFR3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPTSSBQ8NFR3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC12.02□□□□□ -0.48
SPTSSBQ8NFR3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPTSSBQ8NFR3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPTSSBQ8NFR3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
SPTSSBQ8NFR3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPTSSBQ8NFR3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPTSSBQ8NFR3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPTSSBQ8NFR3 FZD10-202ENST00000539839 3282 ntBASIC12.02□□□□□ -0.48
SPTSSBQ8NFR3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 AC127496.7-201ENST00000625110 1798 ntBASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPTSSBQ8NFR3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SPTSSBQ8NFR3 AL365209.1-201ENST00000624418 6473 ntBASIC12.01□□□□□ -0.49
SPTSSBQ8NFR3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPTSSBQ8NFR3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPTSSBQ8NFR3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SPTSSBQ8NFR3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPTSSBQ8NFR3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC12.01□□□□□ -0.49
SPTSSBQ8NFR3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPTSSBQ8NFR3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.01□□□□□ -0.49
SPTSSBQ8NFR3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPTSSBQ8NFR3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPTSSBQ8NFR3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SPTSSBQ8NFR3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 LETM1P2-201ENST00000597330 2178 ntBASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 AL020996.1-203ENST00000536896 2307 ntBASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms